Chelonoidis abingdonii (Abingdon island giant tortoise): 116836552
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Entry
116836552 CDS
T07367
Symbol
AFF1
Name
(RefSeq) LOW QUALITY PROTEIN: AF4/FMR2 family member 1
KO
K15184
AF4/FMR2 family member 1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cabi03021
]
116836552 (AFF1)
Transcription machinery [BR:
cabi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
116836552 (AFF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
116836552
NCBI-ProteinID:
XP_032656118
LinkDB
All DBs
Position
5:20876748..21072056
Genome browser
AA seq
1215 aa
AA seq
DB search
MTSTDTPSSTNGLYNEDRNLLRIRERERRNQEALQERDTYPENAPLFAEPYKTNKEDELS
SRIQNMLGNYEEVKELISTKSHQNLIGIPKSIVPLIHQGKPDRPFFPEKTSSTLPTSFQH
STRHLAMGPPSLTLPSASNSIRYPKTQARMEPAANLHTKSHSLSSGQSQGPEQRRSGQES
HHGGRHKKNDRRVDENGAAELQATLSELSPLLSSLSSPVAPLSPLHSSQHIHSRSQNNNQ
SHGQTYNPMKSPQDFVAGLHDNETRDSSAINLAQPSSQTFPPALPPKNSAMQQKPTAYVR
PMDGQDQAPNESPELKPLPEEYPGQTFGKIADLKTNAKAKLSKLKIPSEPTEQTFPNEVH
CVEEILKEMTHSWPPPLTAIHTPSTAEPSKFPFPIKESQLVESVIQNQKQYDAPSKTLPX
SQQGTSMLQDDLQLSDSEDSDDDRVSEKPPPSSAPPSASQSQPESVASAHSSSAESGSTS
DSDSSSDSESESSSSDSEANEPPRTSTSEPDPPTSNKWQLDNWLTKVNQPAAPNENLSEV
VHRHDHQESKGQGKSSSSSHERSESNELHSKNSSKITRAPQAVHLPSKQTCQKSPTRTEE
PSQRPTVGTKKPSKVPLQEAHRGSLKVESEPGPYGVKDQSSRDKPKVKTKGRPKSRDKKE
LKPTVQEPLEKKKHKSSHQAKAFLDPKPVKDIVAGSAPEHFPLSPVAQSQKPATPTRTSG
KKPAVVVREDFHRDKLLLPIRDKTLLSPLRDFPVPHALVVKIELCLLSRIPQPPGKGSRQ
KKLEGKELSSVRKQDLEKKSTETPNKSLKKRKGEVEKEPDKKKIKLEKETKSLLSSSHKD
SSKMKVSKFPSETLKKELLLPPPLPPMSTAQSTQKPAKMAQKRHKGESSTCSQLPDTNNR
TAKSKSNHKDSSSSKHRKVEGKHSEHSKSNKGPSGDVKNPFPVPSLPNGTSKPRRPQIKF
EKQHPMEYHIEEAKRLKHKADTMTDKVAKAFQYLEAALSFIEYGIAVESDALTPKSAYTI
FTDTIDLLKFIMTLKSFSDTSASAHEKIFAVLCMRCQSILHMAMFRYKKDTAVKYSRTLN
EHFKNSSRVTQAPSPCVARSTGTPSPLSPMPSPASSVSSQPGSNASNCGSGGIGSSINTL
HNIPSITFSYVNITSYILYAYDIWEQADALARKNKEFFAELSAAVCPLALNSSMTELVHY
TRQGLQWLRLETSTP
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgacatccacggacacaccaagcagcaccaatggcttgtacaatgaggatagaaatttg
ctccggatcagagagagagagagacggaatcaggaagctcttcaggagagagacacatac
ccggaaaatgcccccctctttgcagaaccttacaagactaacaaagaagatgaattgtcc
agtcgaattcagaacatgctgggtaattatgaagaggtgaaggagctaatcagcaccaag
tcccatcagaatctgatagggatacctaagagcattgttcctctgatccaccagggaaag
cctgatcgcccgttctttcctgaaaagaccagcagtacattaccaacctcattccagcac
agcacccgccatctggccatgggaccccccagcttgactctcccatctgctagtaattcc
attcgctacccaaagacacaagcaagaatggaaccagctgcaaatttgcacaccaaaagc
cacagcttgtccagcggtcagagccaaggtccagaacagagacgcagtggtcaggaaagc
catcatggtggtcgccacaagaaaaatgatagacgtgttgatgaaaatggtgctgctgaa
ctgcaagccaccctctcagagctttctcccttactgtcctctttgtcttctccagtggcg
cccctgtcacctctgcattccagtcagcatatccattccaggtcacagaacaataaccaa
agtcacgggcagacttacaatccaatgaaatcgcctcaggactttgtggcaggattgcat
gataacgaaacccgggatagttcagccattaatctggcccaaccatcttctcagacattt
cctccagccttgccgccaaaaaacagtgcaatgcagcagaaacctactgcatatgttaga
ccaatggatggccaagatcaggcgccaaatgagtcaccggagctcaagccacttccggag
gaataccctggacaaacctttgggaaaatagcagatctaaaaacaaatgccaaggccaaa
ctatccaaattgaaaataccgtctgagcccactgagcaaaccttccccaatgaagtccat
tgcgttgaagaaattttgaaggaaatgacccactcatggccacctcccttgacagctatc
catacacctagcacagctgagccttcaaaatttccttttccaataaaggaatcccagctt
gttgaatctgtaatacagaatcagaagcagtatgatgcaccttcaaaaacgttgcaatca
caacaaggaacatcaatgctacaagatgacctccagctcagcgatagtgaagacagtgat
gatgatcgggtctctgaaaagccacctccctcatctgctcctccaagtgcctcacaatca
cagcctgagagtgtggcatcagcacattccagcagtgcagagtcagggagcaccagtgat
tcagacagctcttcagattcggagagtgagagcagttcaagtgacagcgaagcaaatgag
ccaccgagaacttctacgtctgagcctgacccaccaacatcaaataaatggcagctggac
aactggctaaccaaggtgaaccaaccagcagcaccaaatgagaatctcagtgaggttgtc
catagacatgatcatcaggagagcaaggggcaagggaaaagcagcagcagctctcatgaa
cgttctgaatcaaatgagttgcactccaaaaactcaagcaaaataaccagggctccccag
gcggtacatcttcccagcaaacagacctgccagaagtctcccacgcgcactgaggagccc
tctcagaggcccacagttggtaccaagaagcccagcaaggtcccactacaggaggctcac
aggggaagtctgaaagtggaaagtgagcctggtccatatggggttaaagaccagtcttcc
agagacaagccaaaagtaaaaacgaaagggaggccaaaatccagagataaaaaagaattg
aaaccaacggtgcaagagcccttggaaaagaaaaagcacaagagctcacaccaagctaaa
gcatttttggaccctaagcctgtgaaagacattgtggctggcagtgccccagaacatttt
cccctcagccctgtagctcagagccagaagcctgccacccccaccaggactagtggcaaa
aagcctgccgttgtggtcagagaggacttccatagagacaaacttctcttgcctatcagg
gataagacattgttatcgcccctgagggatttcccagtccctcatgctcttgtggttaaa
attgagctgtgtctcctttcaagaattccacaaccacctgggaaagggagtcgccagaag
aaacttgagggtaaagaactctcgagtgtgaggaagcaggatttggaaaagaaaagcaca
gaaactcctaacaagtctctcaaaaagagaaagggagaagtggagaaagagcctgataag
aagaaaatcaagttggagaaagaaaccaaatcattgttgtcttcaagtcacaaagactcc
agtaaaatgaaagtatccaaatttccatccgagacactgaagaaggagctcctgctacca
ccaccgttgccaccaatgtctactgcgcagtctacccagaagccagccaagatggcacaa
aagagacacaagggcgagagcagcacctgcagccagctgcctgacacaaataaccgaact
gccaagagcaagagcaaccacaaggattcttcatcctccaagcacaggaaagtggagggg
aagcattctgaacattctaaaagcaacaaaggaccttcaggagatgttaaaaaccctttc
ccggtgccttctttgccaaatggtacctccaagccaaggagacctcaaatcaagtttgaa
aaacaacatccgatggagtatcacatagaggaggccaaaagactgaagcacaaagctgac
acaatgacagacaaggttgcaaaggcatttcagtacttggaggctgccctttccttcatc
gagtatggaattgctgtggaatctgatgcactgacaccaaaatcagcatacaccatattc
acagacaccatagatctccttaaatttataatgacattaaaatccttttcagatacctcg
gcatctgcacatgaaaaaatctttgctgttttgtgcatgcgctgccaatccattctgcac
atggcaatgtttcgttacaaaaaagacactgcagtaaagtattcccgaactctcaatgaa
cacttcaagaattcttccagagtcacgcaagcaccttctccgtgtgttgcaagaagcaca
ggcacaccttctcctctttccccgatgccctctcctgccagctctgtgagttcccagcca
ggatcaaacgctagcaactgtggcagtggaggcattggttcttcaatcaacactctacat
aatatcccaagcataaccttttcctatgtcaacatcacttcctatatcctctatgcctat
gatatttgggagcaggccgatgcattggccaggaagaataaggaattctttgccgaactc
agtgcagcagtgtgccctctggcactgaacagtagtatgactgaactggtacactacact
aggcagggtttacagtggctgagactggaaacaagtacaccttaa
DBGET
integrated database retrieval system
