KEGG   Chelonoidis abingdonii (Abingdon island giant tortoise): 116836655
Entry
116836655         CDS       T07367                                 
Symbol
VCP
Name
(RefSeq) transitional endoplasmic reticulum ATPase
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
cabi  Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04137  Mitophagy - animal
cabi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:cabi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    116836655 (VCP)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    116836655 (VCP)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cabi03019]
    116836655 (VCP)
   03009 Ribosome biogenesis [BR:cabi03009]
    116836655 (VCP)
   04131 Membrane trafficking [BR:cabi04131]
    116836655 (VCP)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cabi04147]
    116836655 (VCP)
Messenger RNA biogenesis [BR:cabi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     116836655 (VCP)
Ribosome biogenesis [BR:cabi03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    116836655 (VCP)
Membrane trafficking [BR:cabi04131]
 SNARE
  SNARE associated proteins
   Others
    116836655 (VCP)
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    116836655 (VCP)
Exosome [BR:cabi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   116836655 (VCP)
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N AAA_16 CDC48_2 AAA_5 AAA_33 AAA_2 AAA_22 TIP49 AAA_14 NPHP3_N RNA_helicase Vps4_C AAA_28 nSTAND3 Parvo_NS1 Mg_chelatase AAA_17 IstB_IS21 ATPase_2 AAA_18 AAA_7 ATPase DUF815 ABC_tran AAA_24 NB-ARC TsaE ResIII Viral_helicase1 NACHT Sigma54_activat SLFN-g3_helicase KAP_NTPase DUF3944 Zot
Other DBs
NCBI-GeneID: 116836655
NCBI-ProteinID: XP_032656291
Ensembl: ENSCABG00000006878
LinkDB
Position
Unknown
AA seq 805 aa
MRRSDSKADDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLLKG
KKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDD
TVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTV
IHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGI
LLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAII
FIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG
RFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQ
AIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGG
LEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFIS
IKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVI
NQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANL
RKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAME
VEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGGA
GPSQGPGSGSGGNVYSEDNDDDLYG
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgcgtcgatccgattctaaagcagatgacttatctaccgcaattctaaagcagaagaac
aggcccaatcggttaattgtcgatgaagccatcaatgaggacaacagtgttgtgtcgctc
tctcaggcaaaaatggatgaattgcagctgttcagaggagacacagttctgctaaaagga
aagaagaggcgagaagcagtctgcattgtcctgtcagatgatacctgctcagatgagaag
attcgcatgaatagggttgttcgtaacaacctgagagtgcgccttggtgatgtgatcagc
atccagccctgcccagatgtgaagtatggcaaacgcatacatgtgttaccgattgatgac
acagtggaagggatcaccgggaatctgtttgaggtctacctcaaaccatacttcctggaa
gcatatagaccaatcagaaaaggtgacatcttccttgtgcgtggagggatgcgcgctgtg
gagttcaaagtggtggagacagacccaagcccttactgtatagtggctccagatacagtg
atccattgtgaaggggagcctatcaaaagagaggatgaggaagagtccctgaatgaagtg
ggctatgatgacattggaggctgccggaagcagctggcccagatcaaggagatggtggag
cttccgctcagacaccctgcacttttcaaggccataggtgtgaagcctccacgtggaatc
ctgctgtacggccctcctggtaccggtaagaccctgattgcacgtgcagtggctaacgaa
actggagctttcttcttcctgatcaatggccctgagatcatgagcaagctggctggtgag
tctgagagcaatctcaggaaagcttttgaggaagctgaaaaaaatgcgcctgccatcatc
tttatcgatgaactggatgccattgctccaaagagggagaagacgcatggagaggtggaa
cgtcgcatagtgtctcagctgctgactcttatggatgggctgaaacagagagcacatgtg
attgttatggcagctaccaacagacctaacagcattgaccctgcactcaggcgattcggt
cgctttgacagagaggtagatatcggtatccctgatgccaccggccgcctggagattctg
cagatccacacaaagaatatgaaactggctgatgatgttgatctggagcaggtggccaat
gagacccacggccatgttggtgcagacttggctgctctttgctccgaagctgctcttcag
gccatcaggaagaagatggatctcatagacctggaggatgaaaccatagatgctgaagtg
atgaattcactggctgtgaccatggatgacttcaggtgggctctgagccagagcaacccc
tcagctctgcgggagaccgtggtggaggtgccacaggttacctgggaagatattggtggt
ctagaagatgtgaagagagaactccaggagcttgtgcagtatcctgtggagcacccagac
aaattcctcaaattcggcatgactccatccaaaggggtcctgttttatggaccacctggc
tgtggtaagacactgctggctaaagccattgccaacgaatgccaggccaacttcatctcc
atcaaggggccagagcttctcaccatgtggtttggtgagtctgaagccaacgtgcgtgag
atctttgacaaggcccgccaagcagcaccctgcgtgctcttcttcgatgagcttgactcc
attgcaaaggctcgaggtgggaacatcggggacggtggtggcgccgcagaccgtgtcatt
aaccagattctgacagagatggatggcatgtccaccaagaagaacgtcttcatcatcggt
gctaccaacaggccagacatcatcgacccggccatcctgcgtcctggccgcctggatcag
ctcatctatatccccctgcctgatgagaagtcacgaatcgccatcctcaaggccaacctg
aggaagtcccccgttgccaaggatgtggacctggagttcctggcgaagatgaccaacggc
ttttcgggagctgacctgaccgagatctgccagcgtgcctgcaaactggccatccgcgag
tccattgagaacgagatcaggcgagagcgtgagaggcagaccaacccttctgccatggag
gtggaggaggacgacccggttccggagatccgcagggatcactttgaggaggccatgcgc
tttgctcgccgctctgtcagtgacaacgacatcaggaaatacgagatgtttgcacagact
ctacagcaaagtcgcggctttggcagcttcagattcccatcaggtaaccagggtggtgct
ggcccgagccaaggcccaggcagtggcagcggagggaacgtgtacagtgaagacaacgac
gacgatctctatggttaa

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