Chelonoidis abingdonii (Abingdon island giant tortoise): 116836664
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Entry
116836664 CDS
T07367
Symbol
HPSE
Name
(RefSeq) heparanase isoform X1
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi00531
Glycosaminoglycan degradation
cabi01100
Metabolic pathways
Module
cabi_M00078
Heparan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
116836664 (HPSE)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cabi00536
]
116836664 (HPSE)
Enzymes [BR:
cabi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
116836664 (HPSE)
Glycosaminoglycan binding proteins [BR:
cabi00536
]
Heparan sulfate / Heparin
Enzymes
116836664 (HPSE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
116836664
NCBI-ProteinID:
XP_032656306
UniProt:
A0A8C0IPF1
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All DBs
Position
5:complement(18435494..18468277)
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AA seq
525 aa
AA seq
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MLLWLLLLAGEAAAGSAVAVLSAELRGEPVQEVSPAFLSLTIDANLAADPRFIPILGSPK
LRTLARGLTPGFLRFGGTRTDFLIFDPEKDSTLDERDFWEPQENQGICGVRAIPTAVEEL
LLSQWPIQEKILLKEQYWKKYKNTTITKSTVDILYSFAKCSKLDLIFGLNALLRKGGLQW
DSSNAQLLLDYCASQHYNMSWELGNEPNSFRRKSGIYIDGSQLGQDFIHLYHLLRNYSSY
KNSKLYGPDVGQPRKNTQKLLKSFLKSGGKVIDSVTWHHYYVNGRIATREDFLSPEMLDT
FITAVKDVLQIVDGTVPGKKVWLGETSSAYGGGAPRLSNTYVAGFMWLDKLGLSARMGID
VVMRQVFYGAGTYHLVDANFEPLPDYWLSLLYKKLVGTKVLKVGLKGADPKKLRVYLHCT
NNHNSMYKEGDVTLFLLNLYNVTKHVQLPHNLSNKHIDEYLLLPHGEQHILSRSVQLNGH
VLRMVDNKTLPALSKKPLPPGSALGLPAFSYGFYVIKNAKAIACI
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctggctgctgctgctggccggggaggcggcggcgggctccgcggtggcggtg
ctgagcgccgagctgcgcggcgagccggtgcaggaggtgagcccggctttcctctccctc
accatcgatgccaacctggccgcggaccccaggttcatccccatcctgggttctcccaaa
ctgcgcaccttagcaagaggtttgactccaggcttcttgagatttggtggcaccagaacc
gacttcctgatctttgatccagagaaggattcaactttagacgagagagacttttgggaa
ccacaggagaatcaaggtatttgtggagtaagagctattcctactgctgtggaggagcta
ctgctatctcaatggcccatccaggagaagatactccttaaggaacagtactggaaaaaa
tacaaaaacactaccattacaaaaagtacagtggacattctgtatagctttgcaaagtgt
tcaaagctggatctgatctttggccttaatgccttacttcgaaaaggtggcttgcagtgg
gatagttcaaatgctcagttgctcttggattattgtgcttcccagcattacaacatgtct
tgggaacttgggaatgagccaaacagtttcaggaggaagtctggcatctatattgatggt
tcccaactagggcaagactttattcacctgtatcaccttttgagaaactacagcagttac
aagaattcaaaactttatggccctgatgttggtcaaccacggaaaaacactcagaagttg
ctgaagagcttcctgaaatcaggagggaaagtaattgattctgttacctggcatcattac
tacgtaaatggacgaatcgctaccagagaggatttcttgagtcctgaaatgctggatacc
tttattacagcagtaaaagatgttcttcagattgttgatggaactgtacctggtaaaaag
gtgtggctaggagaaacaagttcagcctatggaggtggagctcccagactgtctaataca
tatgttgctggttttatgtggttggacaaactaggactgtcagccagaatgggtattgat
gtggtgatgcgacaagtgttctatggagcaggaacctatcacctggtggatgcaaatttt
gaacctttgcctgattattggctttctctgctgtacaaaaaactggttggcaccaaggta
ctgaaagttggcctgaagggagcagatccgaagaagcttcgagtgtaccttcattgcacg
aataaccacaactcaatgtacaaagaaggggatgttactctgtttcttttaaacctctat
aatgtcaccaaacacgtgcagttgccccataacttatctaataaacatatagatgaatac
cttttattacctcatggggaacagcacatactttccaggtctgttcagttgaatggtcat
gtcttaaggatggtggataacaaaacactgccagcactttctaagaaacccctccctccc
gggagtgctcttggccttccagctttttcatacggattttatgtaataaaaaatgcaaaa
gctattgcctgcatttaa
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