KEGG   Chelonoidis abingdonii (Abingdon island giant tortoise): 116836670
Entry
116836670         CDS       T07367                                 
Symbol
HELQ
Name
(RefSeq) helicase POLQ-like isoform X1
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
cabi  Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:cabi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cabi03400]
    116836670 (HELQ)
Enzymes [BR:cabi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     116836670 (HELQ)
DNA repair and recombination proteins [BR:cabi03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    116836670 (HELQ)
SSDB
Motif
Pfam: POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 DNA_pol_lambd_f DUF4332 Cdd1 DUF3135
Other DBs
NCBI-GeneID: 116836670
NCBI-ProteinID: XP_032656317
Ensembl: ENSCABG00000007074
LinkDB
Position
Unknown
AA seq 1069 aa
MEGGGPAVRRRSRAASARKRSRVRAQSRGACSPPAQKKPSSGAGEEPQPAPSSPEYNNDS
EEDMFGDYDSFSGNDSLLAQVDNMEQECIQSIDLTSCTKNMEDEATVEPSFGYLQLQNAK
SKELIFSAAGNITGFRTEEENHLRITSEQENRTLESEDCFLDDLPSSQLLYFEEMNKTSV
DSRKSSGTKENANDMNSCLDKMLNRSSCHHNAEHTKINNELSLSTMSNLNKRKSLKDHLK
NTMTGNAKAQTPQVSRTKQLKEAVLSEEICAAKKTIETSSVDIGPFYGLPSKVKDLFVQF
RGIEKLYEWQHTCLTLESLQQRKNLIYSLPTSGGKTLVAEILILQELLCRQKDVLMVLPY
VAVVQEKVWALSSFGIELGFLVEEYAGSKGRFPPIKRRMKKSLYIATIEKGHSLVNSLIE
TERVGDLGLVVVDELHMLGEGSRGAILEMILAKILYTSKTTQIIGMSATLNNVGDLQQFL
QAEYYTNNFRPVELKEYVKIQDSIYEVDNKAENGLTFSRLLNFKYSSNLQKMDPDHLIAL
VTEVIPSYSCLVFCPTKKNCENVAEMICKYLNKEYKNHRESEKQDLIKDLKNIGKGSLCP
VLKRTIPFGIAYHHSGLTSDERKCIEEAYSTGVLCLLTCTSTLAAGVNLPARRVILRAPY
VATEFLKKSQYKQMIGRAGRAGIDSAGESILIVQKKDKHLVRDLVNSPLENCYSNLFLEF
TKGIQSLLLSLVGLKIARNPEEIYHFMCSTLFGVQQQFLSKEKSLSAITREALGCLIEKG
LLKGKMTSEKEQKSQSNLEITQLGQATYKGSIDLAYCDALYRDLKKGLEGLVLESCLHLL
YLTTPYDMTYHCRPDWIIYFRQFSQLNSVEQKVAAIVGVPESLITKKASGQAIKKDMDNC
VINRLYLSFVLYALLKETNIWNVSEKFNVSRGYVQNLLNSAASFSSCVLHFCEELEEFWV
YKALLMELTKRLTYCVKAELVPLMEVAGVLESRAKQLYDSGYKTLAHLANADPETLVKMI
EHLSRRQGRQIVSSAKMLLREKAEALQEEVEELLKVPTDTSDGLLTTLP
NT seq 3210 nt   +upstreamnt  +downstreamnt
atggaggggggcggccccgcggtgcgcaggaggagccgtgccgcctctgcccgcaagagg
agccgggtccgagcccagtctcgcggcgcctgctcccctcctgcccagaaaaaaccgagc
tctggggccggggaggaaccgcagcccgccccctccagccctgagtataataatgacagt
gaagaggacatgtttggtgactatgacagcttttctggaaatgattctttgttagctcaa
gttgataatatggagcaggaatgtattcaatctattgacttgacttcatgtactaaaaac
atggaagacgaagctactgtagagccgtcatttgggtatcttcaattgcaaaatgccaaa
agcaaggaactaattttttctgctgcaggaaacataactggtttcagaactgaagaagag
aatcatttgaggatcacaagtgaacaagagaacaggactctagaatctgaagactgtttt
ttagatgacttgccatcatcacagcttctatattttgaggaaatgaataagacctcagtt
gattctagaaaatcatcaggtacaaaagagaatgctaatgacatgaattcttgccttgat
aaaatgttgaatcggtcatcttgtcaccataatgcagagcacaccaaaataaataatgaa
ttgtccctaagcaccatgtccaacttgaataaaagaaagagtctcaaagatcacctaaaa
aatactatgactggaaatgccaaggctcagactccacaggtttctagaactaaacagctc
aaagaagctgttctgtctgaagaaatttgtgctgccaagaaaaccattgaaacttcttct
gttgacattggccctttttatgggttacccagtaaagttaaagatctctttgtacagttc
cgagggattgaaaaactttatgagtggcagcacacttgcttaacattagaatctctgcaa
caaagaaagaacttaatatactcattgccaaccagtggtggaaaaacacttgtagctgaa
attttaattcttcaagaattactctgcaggcagaaagatgttttaatggttctgccatat
gtggctgttgtccaagaaaaggtttgggccttgtcaagttttggaatagagctaggcttc
ttggttgaagaatatgctggaagtaaaggaagatttcctccaatcaaaaggagaatgaag
aaatccctgtacattgctactatagagaaaggacacagcctagtgaactccttgattgaa
acagaaagagttggtgacctgggtctagtcgtagtagatgagttgcacatgcttggtgag
gggagtcgtggagctatactggaaatgattcttgcaaaaattctctacaccagcaaaact
actcaaatcattggaatgagtgcaactttaaacaatgttggggacctgcagcagttcctg
caagcggagtattacactaacaattttagaccagtagaattaaaggagtatgttaaaata
caggatagtatctatgaagttgacaacaaagcagagaatggccttaccttctcacgtctt
cttaatttcaagtattctagtaatctgcagaagatggaccctgaccaccttattgccttg
gtgacagaagtcattccaagttactcctgcctagtcttttgtcccactaaaaagaactgt
gaaaatgtagctgaaatgatatgcaagtacctaaacaaggaatataaaaatcacagggaa
agcgagaaacaagatcttattaaggacttgaagaatattggtaaaggaagtctctgtcct
gttctaaagcgaaccattccatttggtattgcctaccatcacagtggccttaccagtgac
gaaaggaaatgtatagaggaggcttattctacaggtgtcctgtgccttcttacttgcaca
tctacgctagctgctggagtcaacctgccagctcgaagggttattttaagagctccctat
gttgctacagagttcctgaagaagagccagtataagcagatgattggcagagctggtcga
gctggcattgacagtgctggtgaaagtattcttatagtgcaaaaaaaagacaaacatctg
gttcgggatttagtaaacagtcctttggagaactgttacagcaacctctttcttgaattc
actaagggaatccaaagcctgctcctgtctttggttggattaaagattgcaagaaaccct
gaagagatctaccactttatgtgtagcacactgttcggtgttcagcaacagtttttgtct
aaagaaaagagcctctcagctataactagagaagcactgggatgtctgatagaaaaagga
ctactaaaaggaaaaatgacctctgaaaaggaacaaaaatcccaaagtaatctagagatc
acacagttgggtcaagctacctacaaaggctctatagacttggcctattgtgatgctctc
tacagagacttgaagaaaggtcttgaggggctagttcttgagagctgccttcaccttctc
tatctgacaactccatatgacatgacttatcactgtagaccagactggataatctatttt
agacagttcagccagctaaattcagtagaacagaaagtagcagctattgtgggagtccct
gaaagtttgattacgaaaaaggcttctggacaagccatcaaaaaggatatggacaactgt
gtcataaacaggctgtatctgtcctttgttctttatgccctactgaaagagaccaacata
tggaatgtttcagaaaaatttaacgtgtctcgaggatatgttcaaaatctcctgaactct
gctgcctcattctcttcctgtgtgctgcacttctgtgaggagttggaggaattttgggtt
tataaagccctgctgatggaacttaccaagcgattgacctattgtgttaaggcagaactc
gtccctcttatggaggtggcaggggttttagagtctcgagcaaaacagctatatgattca
ggatacaaaactctagcacatctagctaatgcagatccagaaacactggtgaagatgatc
gagcatttgtcacgacgtcaaggcagacaaatagtttcatccgcaaagatgctgttgagg
gaaaaagctgaggctctacaagaagaagttgaagaactgttgaaggtgcctacagataca
tctgatggcctcctaacaactttgccataa

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