Chelonoidis abingdonii (Abingdon island giant tortoise): 116837261
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Entry
116837261 CDS
T07367
Name
(RefSeq) sodium-dependent serotonin transporter-like
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
116837261
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cabi02000
]
116837261
Transporters [BR:
cabi02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
116837261
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
116837261
NCBI-ProteinID:
XP_032657416
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Position
22:3319103..3338303
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AA seq
591 aa
AA seq
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MSEQNSPVQADSLPRQAIQTNPSHTANPVLLMTQTDSREKWSKKMDFLLSVIGFAVDLGN
VWRFPYICYQNGGGAFLIPYTLMAIFGGVPLFYMELALGQFHRAGAISIWKRICPIFKGI
GFAICIIALYVSFYYNTIIAWALYYLYSSFTGTLPWTSCDNPWNTPNCTNYFGKSNVTWT
TFSKSPAEEFYTRKVLEIQESSGLYDVGGIRWQLLLCLFLLFTIVYFSLWKGVKTSGKVV
WVTATLPYIVLLILLVRGATLPGAWRGIVFYLRPDWEKLMSTAVWVDAAAQIFFSLGPGF
GVLLALASYNHFNNNCYRDAIVTSVVNCLTSFLSGFVIFTVLGYMAEMRDVEVEDVAKDK
GPSLLFITYPEAIANMVGSTFFAIIFFLMMITLGLDSTFGGLEAVITAVMDEYPHILAKQ
RELFVLGLITICFLGSLTTLTHGGAYVVKLLEEFGAGCSILAVVLLEAIAVSWFYGIQRF
CDDVKAMLGFTPGIFWKVCWVAISPAFLAFIIVSSLLDQPLLMLFDYRYPEWSISVGYLI
GASSFICIPFYMVYKLVWTPGSLKQRLAVCIRPEKAIRDQQADSVCMSSEP
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcagaactctccagttcaagcggatagccttcccaggcaggctatacaaaca
aaccccagccacactgccaaccctgtgttgctcatgacccaaacagattcccgggaaaag
tggagcaaaaaaatggattttcttttatcagtgattggatttgctgtagatttgggcaac
gtctggaggttcccttatatctgttatcagaatggagggggggcctttctcattccttac
acactgatggccatctttggaggagtacctctcttctacatggagctggccctgggacag
tttcacagggcaggagctatctccatctggaaacgcatctgtcccatctttaaaggcatt
ggctttgctatttgcatcatcgccctgtacgtctccttctactacaacaccatcatcgcc
tgggccctgtactatctctactcctccttcactggtaccctgccctggacaagctgtgac
aatccctggaacacccccaactgcaccaactactttggaaagagcaacgtgacttggacc
accttctccaagtcgccagcggaagagttttatacgaggaaggtccttgagattcaggaa
tccagtggcctatatgatgttggcgggatccgctggcagcttctcctctgcctttttctc
ctcttcacgattgtttacttcagcctgtggaaaggagtgaaaacctcagggaaggtggtg
tgggtgacagctacgctgccttatattgtcctcctcatactgctggttcggggagctact
ctgccaggggcttggagagggatcgtcttctacctcagacccgactgggagaagctcatg
agtactgctgtttgggttgatgctgctgcccagatctttttctccttgggccctggattt
ggtgttcttctcgcgctcgccagttacaaccatttcaacaataactgttaccgagacgcc
atagtcaccagcgtggtaaactgtctgaccagcttcctgtcagggtttgtcattttcaca
gtgctgggctacatggctgaaatgagagatgtggaggtggaagatgtagcaaaagataaa
ggtccgagtctcctttttataacctaccctgaggccatcgcaaatatggtgggttctacc
ttcttcgccatcatattcttcctcatgatgatcactctggggttggacagcacgtttgga
ggcctagaagcggtgatcacagcagtaatggacgaataccctcacatcctagcaaagcaa
agggagctgtttgtacttggcctcatcaccatatgctttctaggctctctaaccaccctt
acgcacggtggagcatatgttgtcaaactgctggaggagtttggtgctggctgctcaatt
ctggcggtggtgttactggaagcaatagctgtgtcgtggttttatggaattcagaggttc
tgtgatgatgtcaaagctatgctgggcttcaccccagggatattctggaaggtctgttgg
gttgccatcagccctgcctttttagcgtttattatagtcagctctctcctggaccagccg
ctgctcatgctgtttgactatcgctatcccgagtggagtatctcagtggggtacctaata
ggagcatcgtctttcatctgtatccctttctacatggtgtacaagctggtctggactcct
ggatcccttaagcagcgtctagcagtgtgtattcgaccagagaaagccatacgagaccag
caagcagattcagtatgtatgtcatcagagccatag
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