Chelonoidis abingdonii (Abingdon island giant tortoise): 116837332
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Entry
116837332 CDS
T07367
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1
KO
K17890
autophagy-related protein 16-1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04136
Autophagy - other
cabi04140
Autophagy - animal
cabi04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116837332 (ATG16L1)
04136 Autophagy - other
116837332 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
116837332 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cabi04131
]
116837332 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
cabi03029
]
116837332 (ATG16L1)
Membrane trafficking [BR:
cabi04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
116837332 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
116837332 (ATG16L1)
Mitochondrial biogenesis [BR:
cabi03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
116837332 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG16
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_EIPR1
ANAPC4_WD40
eIF2A
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_NWD2_C
Beta-prop_HPS5
Beta-prop_WDR19_1st
PUMA_CC
INO80F
Peptidase_M15_4
AP5B1_middle
CCDC93_CC
HEF_HK
DUF7310
WH_CYT4
V_ATPase_I
Synaptobrevin
NPV_P10
FlaC_arch
Motif
Other DBs
NCBI-GeneID:
116837332
NCBI-ProteinID:
XP_032657544
Ensembl:
ENSCABG00000018566
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MTSGLRAATFPTWKRHIAEELRRRDRLQRQAFEEIILQYNKLLEKTDLHAVLADKLQAEK
YDLQSRHEISPGHDGSRNEAQLQEMAQLRIKHQEELTELHKKRGELAQSVIDLNNQMQQK
DREMQINEAKIAEYMQKISELETECQELRSKLQELERANQTLKDEYDALQITFTALEEKL
RKTTEDNQELVTRWMAEKAQEANRLNAENEKDSRRRQAKLQKELAEAAKEPLPVEQDDDI
EVLVDETSDPAEETSPVRTVSRTSSKRLSQPAGGLLDSITNIFGLSESSLLGHHSSDAAR
RRSLSSFPAPQENVDVHPGSSKEVRVPTTAVYVFDAHDGEVNAVQFSPASRLLATGGMDR
RVKLWEVFGDRCELKSSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTL
TGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMS
GHFDKKIRFWDIRTESIVQELELFGRITALDLNPERTELLTCSRDDLLKIIDLRVNAVKQ
TFSAQGFKCGSDWTRVVFSPDGSYVAGGSADGVLYIWNVLTGKVERTLAKHHSSSINAVA
WSPAGAHVVSVDKGNKAVLWSEF
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgacttctgggctcagagctgcgactttccccacgtggaaacgacacattgcagaggag
ctgaggcgccgggaccggctgcagagacaggcctttgaagagatcatcctccagtataac
aagttgctagagaagactgatctccatgctgtgctggctgataagctgcaagcagaaaag
tatgacttgcaaagcagacatgagatcagtccagggcatgatggctcaaggaatgaagct
caattgcaggaaatggcccagctgaggattaaacatcaagaggagctgacagagctgcat
aaaaagcgtggcgagttggcccagtcagtgattgatttgaataaccaaatgcagcagaaa
gacagggagatgcagatcaatgaagcaaagattgcagaatacatgcaaaagatctctgag
ctggaaacagagtgccaggaactgcgcagcaaactgcaagaacttgagcgagccaatcaa
acactgaaggatgaatatgatgctctccagatcaccttcactgccctagaagagaaactg
aggaaaactactgaagacaaccaagagctggtcacacgttggatggcagagaaggctcag
gaagctaatcggctcaatgcagagaatgagaaggactcgaggagacgacaagccaagttg
cagaaagagctagcagaagctgccaaggaaccgctgccagttgaacaggatgatgatatt
gaagtgcttgtggatgaaacttctgacccagctgaagagacttctccggtgcgaactgtt
agccggacatccagtaagcgactgtcacagccagctggaggccttctggactctatcact
aatatttttggtctgtctgagtcttcccttttgggacatcactcttctgatgctgccagg
aggcgctctctgtcctcatttcctgctccccaggaaaatgtagatgtgcatccaggttcc
agtaaagaagtgagagtgcccactactgcagtatatgtctttgatgcacatgatggagaa
gtgaacgcagtgcagttcagtcctgcttcccgattactagcaacaggaggcatggatcgg
agagttaaactctgggaagtctttggagacagatgtgagctgaaaagttctctctctggc
agtaacgcaggaattacgagtatcgaatttgacagtgctggctcctatctcttagcagct
tcaaatgacttcgccagcagaatctggaccgtagatgactatcgattacggcacacactg
acaggccacagtgggaaggttctgtcagccaagttcttgctggataatgcacgcatcgtg
tcagggagtcatgaccggaccctcaagctctgggacctgcgcagcaaagtttgtataaaa
acagtatttgcaggatcaagctgcaatgatatagtgtgcacagagcagtgtgtgatgagt
ggacattttgacaagaagattcgcttctgggacatcaggactgagagcatagtgcaggag
ctggaactgtttgggaggatcactgctttagacctgaacccagagagaacagagctcttg
acctgttcccgagatgatctgctgaagatcattgatttgcgagtcaatgctgtcaaacag
actttcagtgcccagggattcaaatgtggatctgactggaccagagtcgtgttcagccct
gacggtagctacgtggcaggtggttcagctgatggtgtcctgtacatctggaatgtgctc
actgggaaagtggagagaactctcgcaaagcatcacagctcctctatcaatgcagtggcg
tggtcaccagccggtgcccatgtggtcagtgtggacaaaggaaacaaggctgtcctgtgg
tctgaattttga
DBGET
integrated database retrieval system
