Chelonoidis abingdonii (Abingdon island giant tortoise): 116837411
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Entry
116837411 CDS
T07367
Name
(RefSeq) protocadherin-10-like
KO
K16499
protocadherin delta 2
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cabi04515
]
116837411
Cell adhesion molecules [BR:
cabi04515
]
Cadherins
Protocadherins
116837411
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_tail
Cadherin_CELSR2_9th
CD59
Motif
Other DBs
NCBI-GeneID:
116837411
NCBI-ProteinID:
XP_032657657
LinkDB
All DBs
Position
Unknown
AA seq
1004 aa
AA seq
DB search
MPCAREDSASSCWVARVVSGEPYPWRRCRSRGPCAMGTGVWGSGWTWSWQMLLLLVTSCL
EPAAGQLRYSVPEELEHGAFVANIAEDLGLDVSKLSTRRFRIVSRAGTKQHLEVNLENGI
LFVNEKIDREEVCEAGGACLLHLQLVIESPLALYRVEVEVLDINDNAPSFPWPEYVLEVT
ESALPGARFPLESAQDPDVGTNSLRTYQLSPNGFFSLEVQTRSDGSKFAELVLERALDRE
QQRSHRMLLTALDGGLPERSGTAGILVTVLDANDNVPAFDQPSYGVSLPEDAPPGTLVIK
LNATDLDEGTNGEIEFSFSGHAPPRVRQLFSVEPRSGQVRLAGPLDYERARLHELYVQAK
DRGPSAVAVHCRVLVHLLDVNDNAPEVSLTSVSTPVLEDAPPGTVIAVISVLDRDSGDNG
QVSCEIPHNVPFQLQAAFHNYYTLVTTAALDREAVPEYNVSITARDMGSPALLTRKTLTV
QVSDINDNAPRFLQPSYSVYVLENNAPGASICSVSALDPDCRQNAYLSYSIAEGHIQGMP
VATYVSINSDSGHMYALRSLDYEQIRNFQVQVQAQDAGFPPLSSNVTVNVFVLDQNDNAP
VIVSPVPRNGSLATDVVPRSADPGYLVGKVSALDADSGQNSRLSYQILQATDPSLFSVAL
YTGELRTIRAFLDKDATRQRLVIQVRDNGQPPLSASVSLLLSVVESVPETLSDFNELSLN
PELSSSTLTLYLIVSLGSVSFTFLVAIIILMAIKCHKDRHSLHGYGCSLPACCCVKAGAT
ADDFKNSNIKPQLSSGNKVPTNCLEGAGSGPPGYCYKVCLTPESAKSDFMFLKPYSPSPP
RNNEKAAENLPGPGRKPQAVNNTVRAASQIKQPNTDWLPTKTPRSALKSSQSLEDVGGVR
RGVQKEHDRLRTLVTPVSEFQKASGASNSIWTPRYGPLYPPHIPPLDYQHNVYIPGTPTM
VANKEGPRCLDPEDKNSFSTFGKRKKMATYCDIGDSMIINNDLK
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgccttgtgccagggaagacagcgcaagctcctgctgggtggcacgggtggtctcgggt
gagccttatccctggaggcgctgccggagcaggggcccctgcgccatggggactggagtc
tggggcagcggctggacttggagctggcagatgctgttgctcctagtgacttcttgcctg
gagccggcagccggccagctgcgctactctgtccccgaggagctggagcacggcgccttt
gtggctaacatcgccgaggacctcggtctggacgtgtccaagctgtcgacgcggcggttc
cgcatagtgtcccgggcaggcaccaagcagcacctggaggtgaacttggagaacgggatc
ctcttcgtcaacgagaagatcgatcgcgaggaggtgtgcgaggccggcggggcctgcctc
ctgcacctgcagctggtgatcgagagcccactggcgctgtaccgcgtggaggtggaggtg
ctggacatcaacgacaacgcgcccagcttcccctggccggagtatgtgctggaggtgacc
gagtcggcgctgccgggggcccgcttcccgctggagagcgcgcaagacccggacgtgggc
accaactccctgcgcacctaccagctcagccccaacggcttcttctccctcgaggtgcag
acccgcagcgacggcagcaagttcgcggagctggtgctggagcgagccctggaccgcgag
cagcagcgcagccaccgcatgctgctcacggccctggacggcggcctcccggagcgctcg
ggcacggccggaatcctagtcaccgtgctggacgccaacgacaacgtgccggccttcgac
cagccctcctacggggtaagcctgcccgaggacgcgcccccaggcacgctggtcatcaag
ctcaacgccacggacctggacgagggcacgaacggcgagatcgagttctccttcagcggc
cacgcgccgccccgggtgcgccagctcttcagcgtggagccgcgcagcgggcaggtgcgc
ctggcaggcccgctggactacgagcgcgcgcgcctgcacgagctctacgtgcaggccaag
gaccgcggcccctcggcggtggccgtgcactgccgggtgctggtgcacctgctcgacgtc
aacgacaacgcgccggaggtgagcctcacctcggtctccacgcccgtgctggaggatgcg
ccgccgggcaccgtgatcgccgtgatcagcgtgctggaccgggactccggagacaacggg
caggtgagctgcgagatcccccacaacgtgcccttccagctccaggccgccttccacaac
tactacacgctggtcactaccgcggcgctggaccgcgaggccgtgcccgagtacaacgtc
agcatcacggcgcgggacatgggctcgcccgcgctgctcaccaggaagaccctgaccgtc
caggtgtccgacatcaacgacaacgcaccccgcttcctgcagccctcctacagcgtctat
gtgctggagaacaacgccccgggcgcctccatctgctccgtcagcgccctggaccccgac
tgccggcagaacgcctacctgtcctactctattgccgaggggcacatccagggcatgccc
gtggccacctacgtctccatcaactcggacagcgggcacatgtacgcgctgcgctcgctg
gactacgagcagatccgcaacttccaggtgcaggtgcaggcccaggacgcgggcttcccc
ccgctcagcagcaatgtcaccgtcaacgtcttcgtcctggaccagaatgacaacgcaccg
gtcatcgtctcgcccgtgccccgcaatggctcgcttgccacagatgtggtgccccgctcg
gccgaccccggctacctggtggggaaggtgtctgccctagacgcggactccgggcagaat
tcccggctctcctaccagatcctgcaggctactgaccccagcctcttcagcgtggccctg
tacactggcgagcttcgcaccatccgagccttcctggacaaagatgccaccaggcagcgc
ttggtcatccaggtgcgggacaacgggcagccgccgctctccgcctcagtgtccctactg
ctgtctgtggtggagagcgtgcccgagacgctgtccgatttcaacgagctctccctgaac
cccgagctctcctcctccacgctcaccctctacctcatcgtctccctgggatccgtgtct
ttcacctttctggtggccatcatcatcctcatggccatcaagtgccacaaggaccggcac
tccctgcatggctacggttgctccctccccgcctgctgctgcgtgaaggccggggccaca
gccgacgacttcaaaaattccaacatcaagccccaactctcctcgggcaacaaagtgccc
accaactgcctggaaggggcgggcagcggccctcccggctactgctacaaagtctgcctg
actccagagtccgccaagagcgacttcatgttcctaaagccctacagcccaagtcccccg
aggaacaacgagaaagccgccgagaacttaccagggccgggaaggaagccccaagcggtc
aataacaccgtcagagccgccagccagatcaaacagcccaatacggactggctgcctaca
aaaaccccgcgatcagccctgaaaagttcacagagtctggaggacgtagggggagtccgc
agaggagtccagaaagagcacgacaggctacgtaccctggtcactccagtctctgaattc
cagaaagcatccggggcctccaacagcatttggacccccagatacggccccctgtaccct
ccgcacattccgcctctggattaccagcacaacgtttatataccagggaccccaaccatg
gtggcaaacaaggaggggccccgctgcctggatccggaggacaagaacagcttctccact
tttggaaagaggaagaaaatggccacctattgcgacataggcgacagtatgattatcaac
aatgacctaaaataa
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