Chelonoidis abingdonii (Abingdon island giant tortoise): 116837537
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Entry
116837537 CDS
T07367
Symbol
MLH3
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
116837537 (MLH3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cabi03400
]
116837537 (MLH3)
DNA repair and recombination proteins [BR:
cabi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
116837537 (MLH3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
116837537
NCBI-ProteinID:
XP_032657941
Ensembl:
ENSCABG00000022738
LinkDB
All DBs
Position
Unknown
AA seq
1443 aa
AA seq
DB search
MIKCLVEDVRSRLRSGVAINSLAQCVEELVLNSIDAKATCVAIRVDLEAFKVQVVDNGSG
MGREDLNKVGNRYFTSKCNSVEDLENLKFYGFRGEAVASIANMASIVEISSKTNNTVKTF
MKLFQNGKALEVCEAELTRPSGGTTVTVYNLFHQLPVRKKCMDPVLEFERVRQKVEALSL
IHPSVSFSLRNDASCSMMLQLPKTKDMCSRFCQIYGLGRTQKLRKINYTSGGFELSGYIS
SEGHYNKNMQFLYVNNRLVLKTRLHKLMDFLLRKESVICKAKGGLANRQMSSSPVRHRGP
ELYGIFVINVKCQYCEYDVCLEPAKTLIEFRNWDALLACIEEGVKAFLKREHLFVELSSE
DIKEFNEDNGFSLYGIRALQPALSEEKSIQENFKKTCDDIVDSYEMFNFQSKTVRRKVTV
QEKSSDLISSNDNAEKEVSSGLIIAEPADTASPLLNKEGPTSDFSELGISEQEPKEFNNP
KMMFVSCKSSENLSGESRSERVEINSFAEMPLCTENCVEDARMQEDSAAQKSSINIAFGN
GVTQGQHDRVEDTADGPELLCGRALMGMSGAMKDDSRKSKGPNNDGGGRVVRSVPLKLCS
TGLVTHVMQNQPPHEQTEMNCSLNMHSKPGPVIGKDIFGNKMKFSVQGLNVQDISSILNK
EYTTLPNREVCRAYAYEWLENETVSHQKNEELGSITARDRRECVTSHVRELLPVTSLGFD
HHENNPSNRRHMVELSVMPRTQAYKKLSLSVQLGSLERFRRHYGKVRSEPSVSIPEKRSE
FEPPGVLGCLADLDTLKNQNNNFECVNICETQVLEHADSNICQAGCLLSLERSQLCGKET
LLNGKAPCVRESPLTLTDYSQIRRKDLSSSRSLASKLFRMKGDHKEVLATEVVGQVDEQF
QGDSSRKGNTLHLLSQTDDFLRSSYQMCQSSSQEVGVDNCILASASDEQDAPCKMYSTRG
GTMENAVNQSLLINTDGEYMATTSSGLALHSEKSYSEGICKDGNIVDVSSKQTSKATELP
NVTLSSSLEVPGDVTNVVQSKNEESIFSPVWMQHFDVSLGKMVYVNKMTGLSTYSTPPTE
ELQAACTKDITTMAVNVVLQSGFQCRCHPFRSELVLPFLPRPREERILASQDFRDADEES
LQSLFSEWDNPVFARYPEVAVDVSSGQAGSLAVKIHNILYPYRFTKEMINSMQVLHQVDN
KFIACLINTRSDVNADADGNLLVLVDQHAAHERIRLEQLIADSYEKQPEESGKKKLLSSN
ICPPLEIEVTEEQRRLLRCCHKSLEEIGLELSFPENNSSQILVGKVPLCFMEREANELRR
KRQPVAKSIVEELIQEQVELLQTTGGAQGTLPLTFLKVLASQACHGAIKFNDSLTKEESC
QLIEALSSCQLPFQCAHGRPSMMPLADIDHLKQEKQPKPNLSKLRRMAHAWQLFGKQGQH
LEA
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaatgtttggtggaagatgtgcgctccaggttacgctccggagtggccatcaac
tcactggcccagtgtgttgaagagcttgtcctcaatagcattgatgctaaagcaacgtgt
gtggccatacgggtggatttggaagccttcaaggtccaggtggtggacaatggctctggg
atggggagagaggatctaaataaagtgggtaatcgatatttcactagtaagtgcaactcg
gtggaggatttagagaatctgaagttctatggtttccgaggggaggctgtggccagcata
gcaaatatggccagcatagtagaaatttcatccaagaccaacaatacagtgaaaaccttt
atgaaactgtttcagaatgggaaagcactggaagtctgtgaggctgaattgactagacca
agtggtggaacaacagtaactgtgtataacttgttccaccagttaccagtgaggaaaaag
tgcatggatcccgtgctggaatttgagagggtgaggcagaaggtagaggctctttcgctc
atacatccttctgtctcgttttccttaagaaatgatgcttcctgttctatgatgcttcag
ctccccaagacaaaagatatgtgttcccgtttttgtcagatttatggactgggaagaaca
cagaaattacgaaagataaattatacgtctggggggtttgagttaagtggctatatcagt
tctgaagggcattacaataagaatatgcagtttttgtatgtgaataatagactggtttta
aaaacaagattgcataaactcatggactttttattaaggaaagaaagtgttatttgcaag
gcaaaaggtggccttgcaaatagacagatgagttcaagtcctgtccggcatcgtggccca
gagctctatggaatctttgttatcaatgtgaagtgtcagtattgtgaatatgatgtatgt
ctggaacctgcaaaaactctgatagaattccgcaattgggatgcacttttagcttgcatt
gaggaaggagtgaaagcatttttaaagcgagaacacttatttgttgaactgtctagtgaa
gacataaaagaatttaatgaagacaatggctttagtttgtacgggatcagagctctgcag
cctgcactctctgaagaaaagagcatacaagagaattttaagaaaacatgtgatgatatt
gtagattcctatgaaatgtttaattttcagtcaaaaactgtcagaagaaaagtgactgtt
caggaaaagtcttcagatctcataagttcaaatgataatgcagaaaaggaagtctcctca
ggtctgattattgctgaaccagctgacacagcgagtcctctgctcaacaaagaaggcccc
acttctgatttctcagaattaggtatctcagaacaagagccaaaagagttcaacaatccc
aaaatgatgtttgtgagctgcaagtcttcagaaaatctctctggggagtccaggtcagaa
agagtagaaataaacagttttgctgaaatgccactttgtactgagaattgtgtggaagat
gcaagaatgcaggaggacagtgcagctcagaaaagcagcatcaacattgcctttggaaat
ggtgtcactcaagggcagcatgacagagttgaagatacagctgatggaccagaacttctt
tgtgggagagcattgatgggaatgtctggtgcgatgaaagatgacagtagaaaaagtaaa
gggccaaataatgatggtggaggaagggttgttagatcagtaccactgaagttgtgttcc
acaggccttgtaactcatgtgatgcaaaatcagccaccacatgaacaaactgaaatgaat
tgctcattaaacatgcattctaaacctggtcctgtaattggcaaggacatatttggaaac
aagatgaaattttcagttcaaggtctaaatgttcaggatatttctagtattttaaataaa
gagtatactacactacccaatagagaagtatgcagagcatatgcatatgagtggttagaa
aatgagactgtatcacaccagaagaatgaggagttaggttccattactgcaagagataga
agggagtgtgtaacatcacacgttagagagttgcttcctgtcacttccttgggttttgat
catcatgaaaataatccaagcaacagaagacacatggttgagctatctgttatgcccaga
acccaagcctataagaaactgagcttgtccgtacagttggggtctttagagcgattcagg
agacattatgggaaggtcaggagtgaaccatcagtatctattccagagaagaggagtgaa
tttgaacctccaggtgttcttggttgtctagctgatcttgacaccttgaagaatcagaat
aacaattttgaatgtgttaacatttgtgaaactcaagttctggaacatgctgattctaat
atttgtcaagctggttgcctcctttccttggagaggtctcagctctgtggcaaagaaact
ttgttaaatggaaaagctccttgtgtgagagagagtcctttgactttgactgactactct
caaattagaagaaaagacctaagtagcagcagatcactagcttctaaactgttcagaatg
aagggtgaccacaaggaagttttagctacagaagtggtgggacaagttgatgaacaattc
caaggagattcaagcagaaaaggtaacacattgcatcttttgtctcaaactgatgatttt
ttgcggagttcttatcaaatgtgtcaaagctcctcacaagaagtaggggtagacaattgc
atccttgcgtctgcctctgatgagcaggatgctccctgcaaaatgtatagtacaagagga
gggactatggaaaatgccgtaaaccagtcactgctcatcaacacagatggggagtacatg
gccaccacaagcagtggtttggcattacacagtgaaaagagttattctgagggcatctgt
aaagatggaaatattgtggatgtatcttcaaagcagacttcaaaagccactgagcttccc
aatgtaactttatcaagtagtttggaagtacctggagatgtcacaaatgtagttcagtct
aaaaatgaggaatcaatatttagtcctgtctggatgcaacactttgatgtttcactgggt
aagatggtatacgtcaataaaatgactggactaagcacctacagtactcctccaactgaa
gaacttcaggctgcttgtactaaagatataactacaatggctgtgaatgttgtcttacag
agtgggtttcagtgcaggtgccatccttttagaagtgagcttgttcttcccttccttcct
agacctcgggaagagaggattctggcaagccaggatttcagagatgctgatgaggagtct
ctccagtccttgttttcagagtgggataatcctgtatttgctcgctacccagaggttgct
gttgatgtgagcagtggccaggctgggagtctggctgtgaaaattcataatatcttatat
ccctatcgtttcaccaaggaaatgattaattcaatgcaggttcttcaccaagtggacaat
aaatttattgcttgtttaatcaacactaggagtgacgtgaatgcagatgcagatggaaac
ctgctggtgttggtggatcagcatgcagcccatgagcgtatccgcttggagcaacttatt
gcagattcctatgagaagcaacctgaagaatctggcaagaagaaattgctgtcctccaac
atctgtcccccactggagattgaggtaacagaggaacagagaagacttttacggtgctgc
cacaaaagcttggaggaaataggccttgaattatcatttccagagaacaacagctcccag
attctagttgggaaagtgcccctgtgttttatggagagagaggccaatgaattacgaagg
aaaagacagcctgtggctaaaagcattgtggaggaattgattcaagaacaagttgagcta
ttgcagaccacaggaggtgcacaagggacactcccactaacctttctaaaggtgctggct
tcccaggcatgccatggagctattaagtttaatgacagcttgactaaggaggagagctgc
cagcttattgaagctttgtcctcttgccagctgcctttccagtgtgctcatgggagacct
tccatgatgccacttgcagatatagaccacctgaagcaggaaaagcagcctaaacctaat
ttgtctaaactgcggagaatggcccatgcctggcagctgtttgggaaacaaggacagcac
ttggaagcgtga
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integrated database retrieval system
