Chelonoidis abingdonii (Abingdon island giant tortoise): 116837607
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Entry
116837607 CDS
T07367
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cabi01002
]
116837607 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cabi04121
]
116837607 (USP42)
Enzymes [BR:
cabi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116837607 (USP42)
Peptidases and inhibitors [BR:
cabi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116837607 (USP42)
Ubiquitin system [BR:
cabi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116837607 (USP42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
116837607
NCBI-ProteinID:
XP_032658060
LinkDB
All DBs
Position
9:15306527..15346950
Genome browser
AA seq
1401 aa
AA seq
DB search
MTIVDRVSESSNPAACQKQPCSSVVPSAGDMDSASASWGAVSSLEVPKHKITLGPVPGAA
VYSSSSVPDKSKPSAQKDQSISDGIAPPQKVLFPAEKICLKWQQTHRVGAGLQNLGNTCF
LNSALQCLTYTPPLANYMLSHEHSKTCHEQGFCMMCTMQAHITQALSNSGNVIKPMAVIN
DLRRIAKHFRFGNQEDAHEFLRYTVDAMQKACLNGSNKLDRHTQATTLIYQIFGGYLRSR
VKCMNCKGVSDTFDPYLDITLEIKTAQSVNKALEQFVKPEQLDGENAYKCSKCKKMVPAS
KRFTIHRSSNVLTLSLKRFANFSGGKITKEVKYPEYLDIRPYMSQPNGEPIIYVLYAVLV
HTGFSCHAGHYYCYIKASNGQWYQMNDSIVSNSDIRSVLNQQAYVLFYIRSHDMKNGGEH
AHSIHTPGQSSPRPVISQRVVNSRQGASGFIGPQLPPHMIKNSSHLNGTGSLKETPSSSV
ASASNVTLNRPASAPPSTSIQNWTINRPTIADPSKKQKITISIHNNKLPTRQTLSQPNLH
NSLENLSKPVPSSTITNSSAVKSTSNAPTSVATKVSKQTTPSESCSKPLMNGKSKLNSST
LVPYGAESSEESDEESKGLVKANGHSKSFNGILLGNVVNTLQNSCSSCQDAEEVVSQHEL
PKNVTVNGAISIDRDPEENGLKFDEPTCQVKPVKSTEIPFSKVNGLHGKIIPTALPPVPE
DRILESFRYNQLKSLSEEISATGLEKTSENDGHIETLVSGNNTVSYEKSNKVPANFSCNV
QNPFTTSDAEIISTKEEIAESIVSKTDNAHSDISGQCNTKKISLGIDDEFSKQCDPKDYA
DKIRGMQEVKMTLKERPLHIRGSAETAEKLGQSPFLKSDSECSSKKLAALNIIDECQETK
ESANNYTDVLPTNDSSATRLDEVLESHYSKENDGLDGNEICEENKDRQKFKSHSPVKERN
CTPKKADKGHYRTKRERSESEEQEKLTKRKPDDDYSRKRQSYSKESMKQDRYKQEHCNGN
KYKLTHSERNSPDNGRSLGKYTNYRSRSRGKTDQERSRYYHSKRERSWSRERYYQDIPRR
WDKCRYYNDYHPSYTARDGRERKFFHGDRDYDKSSQVYNSRSYRDYYYTSRWNHEPIARE
REKHHFGSSKIDLYNCSAPSQHSEKYSHEKCASMSEENNSSFEMSCHKYEYLKDRKRKCA
SLEGSDSDMEKKHRRSLESEPPEEQKVKKHKKSKKKKKSKDKHREKDERHRQDSDFSGAC
SDSDIHKHKKKKKKKKKHTKKSEGFIDYLDPNIQKAAGSETKTWEKKEFHCTDDPPSEEY
SKHGSRPHEGGDADSCHKTKYIGGGQENSYHVSKEYSKAIDLLCHKDHGHTVIKSLDGNF
AYTDETRWKIQSVLMEAIPTV
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacagagtatctgagtcttcaaaccctgctgcttgtcagaagcagcct
tgtagctctgtggtaccctctgctggagacatggactcagcctctgcaagttggggtgct
gtatcatctttggaagttccaaagcacaagatcactttgggaccagtacctggtgctgca
gtttattctagttcatctgtacctgataaatccaagccttcagctcagaaagatcaatct
attagtgatggcattgctccgccacagaaggttctttttccagcagagaagatttgtttg
aaatggcagcaaacacatagagttggagctggactccaaaatcttggcaatacatgtttc
ctcaactctgctctgcagtgtttgacttatacaccccctcttgccaactacatgctttct
catgaacactccaaaacatgccatgaacaaggattctgcatgatgtgtacgatgcaagct
cacattacccaggcgctctctaactctggcaatgtcatcaaacctatggctgtcatcaat
gatcttagacggatagcaaaacatttccggtttggaaatcaggaagatgcacatgaattt
ctacgctacactgttgatgctatgcagaaagcatgtttgaatggaagcaacaaattagac
agacatacccaggctaccacgctcatctatcaaatatttggagggtacttaagatcaaga
gtaaagtgtatgaactgcaaaggcgtctcagataccttcgatccgtaccttgatattaca
ttggagataaagacagctcagagtgtaaacaaagctctggaacaatttgtgaagcctgaa
caactggatggtgaaaatgcctataaatgtagcaagtgtaagaagatggttcctgcttca
aagaggtttacaatacatcggtcttctaatgttcttacattgtctctgaaacggtttgca
aattttagtggtggaaaaattaccaaggaagtgaaatatcctgagtatctggatattcga
ccatatatgtctcaaccaaatggagaaccaatcatttatgttttatatgcagtcctggtg
catacaggtttcagctgtcatgcaggacactactactgctatataaaggccagtaatggg
cagtggtaccagatgaatgattctattgtgtccaacagtgacatcagatctgtgcttaat
cagcaagcttatgtgcttttttatatcaggtcccacgatatgaaaaatggaggagaacac
gcccattctattcatacaccaggacagtcttctccccgtccagtgatcagtcagcgggtg
gttaatagcaggcagggggcatcaggatttataggaccacagcttcctcctcacatgatt
aagaattccagtcatttaaatggaactggatcactgaaagaaactccaagcagttctgtg
gcaagtgctagcaatgttaccctaaacagaccagcttcagctccaccttcaacttccatt
caaaattggacaattaacagacccactattgctgatccttcgaaaaaacagaaaatcact
atcagtattcacaataacaaattgcctactcgccaaactctgtctcaacccaacctccat
aattctttggagaatctcagcaagcctgttccttcgtccacgattacgaattcctctgca
gtaaagtctacctcaaatgcacctacgtcagttgctactaaagtatctaaacaaacaact
cctagtgaatcttgttctaagccattaatgaatggcaagtctaaactaaactctagtacg
ttggtcccttacggtgcagaatcttcagaagaatctgatgaggagtcgaagggattagtt
aaggcaaatggccactcaaaatcttttaatggaattttgcttggaaatgtagttaataca
ttacagaactcttgttcttcctgtcaagatgctgaagaggttgtatcccagcatgaactg
ccaaaaaatgttacagttaatggtgctattagtatagatagagatcctgaagaaaatgga
ttgaaatttgatgaacctacttgccaagtcaagcctgttaaatctacagaaattccattt
tctaaagtgaatggattgcatggaaaaataatacctacagctttgccaccagttcctgaa
gatagaattttagagtctttccgatataaccagttgaaaagcttgtcagaggaaataagt
gcaactggacttgaaaaaacttctgaaaatgatggtcatatagaaactttagtgagtggc
aacaatactgtttcctatgagaagtctaacaaagttcccgctaactttagctgcaatgtc
cagaatccctttactacatcagatgctgagatcatttctaccaaagaagaaattgccgaa
agtattgtatcaaaaactgataatgcacattctgatatcagtggtcagtgtaacactaag
aaaatatccctgggaattgatgatgaattctctaaacagtgtgatcccaaggattatgca
gataagataagaggaatgcaagaggtaaaaatgactttgaaggagagacctctgcacatc
agagggtctgctgagactgcagagaaattggggcaaagccccttcctaaagtctgacagt
gaatgtagttctaaaaaacttgcagctctaaacattatagatgaatgccaagaaacaaag
gagagtgctaataattacacagatgtactacctactaatgactcttctgctacaaggttg
gatgaagttttagagagtcattattctaaagaaaatgatggactggatggtaatgaaata
tgtgaagaaaataaggataggcaaaaatttaagtctcattctccagttaaggaaagaaat
tgcacccccaaaaaagctgacaaagggcattaccgtactaaaagagagcgctctgaaagt
gaagagcaggagaagctaaccaaacgcaaaccagatgatgattattccagaaaaaggcaa
tcctacagcaaggagagtatgaagcaagatcgctataagcaggagcactgcaatggaaat
aagtacaaacttacgcatagtgaaagaaacagccctgataatggcagaagtttaggaaaa
tacaccaattatagatcccgaagtagagggaaaactgatcaggagaggagtagatattac
cattctaaaagggaaagatcttggagtagggaaagatattaccaagatataccaaggaga
tgggacaagtgcagatattacaatgattatcatccttcttatacagcaagagatggtaga
gagagaaaattttttcatggggacagagactatgacaaatcaagtcaggtttacaacagt
aggtcatacagggattattattacacaagcagatggaatcatgaaccaatagctagagag
agagagaaacatcattttggcagctccaaaatagacttatataattgctcagctccctct
cagcactctgaaaaatattcccatgaaaaatgtgcatccatgtctgaagaaaacaattca
agttttgagatgtcttgccacaaatatgaatatctaaaagacagaaaaagaaaatgtgct
agtctagaaggtagtgacagtgatatggaaaagaaacacagaaggagtctggagagtgag
ccaccagaagagcaaaaagtgaaaaaacacaagaagtcaaagaaaaaaaagaagtccaaa
gataaacacagagagaaagatgagagacaccgccaagattcagacttctctggggcctgc
tctgattctgacatccacaaacataagaaaaagaagaagaaaaagaagaaacatacaaag
aaatctgagggctttattgactatttagatcctaatatccagaaggctgctggctctgag
actaagacatgggagaaaaaagaatttcattgtacggatgaccctccatctgaagaatat
agtaaacatgggagtaggcctcatgagggaggggatgctgattcctgtcataaaacaaaa
tacataggaggaggccaggaaaatagctatcacgtatctaaagaatatagcaaagctata
gacctactttgtcataaggaccatggacacacagtcattaaatctttggatggcaacttt
gcatacacagatgaaactagatggaaaattcaaagtgtgttgatggaagccatccctaca
gtgtaa
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integrated database retrieval system
