Chelonoidis abingdonii (Abingdon island giant tortoise): 116838038
Help
Entry
116838038 CDS
T07367
Symbol
LRP6
Name
(RefSeq) low-density lipoprotein receptor-related protein 6 isoform X1
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04150
mTOR signaling pathway
cabi04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
116838038 (LRP6)
04150 mTOR signaling pathway
116838038 (LRP6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cabi04131
]
116838038 (LRP6)
Membrane trafficking [BR:
cabi04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
116838038 (LRP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
DUF5050
EGF_LRP2
SGL
EGF
cEGF
Motif
Other DBs
NCBI-GeneID:
116838038
NCBI-ProteinID:
XP_032658908
Ensembl:
ENSCABG00000010620
LinkDB
All DBs
Position
Unknown
AA seq
1611 aa
AA seq
DB search
MGPGLRSLLLCSFCALMRAAPLLLYANRRDLRLVDAANGKENATVVVGGLEDAAAVDFVF
FRGLIYWSDVSEEAIKRTEFNKTGSVQNVVISGLLSPDGLACDWLGEKLYWTDSETNRIE
VSNLDGSLRKVLFWQELDQPRAIALDPARGFMYWTDWGEVPKIERAGMDGSSRSVIINTD
IYWPNGLTLDYEEWKLYWADAKLNFIHKSNLDGTHRQAVVKGSLPHPFALTLFGDTLYWT
DWNTHSILACNKYSGEDLREIHSNIFSPMDIHVFSQRRQPNATNPCGSNNGGCSHLCLMS
PIKPSYQCACPTGVKLLENGKTCKDGATELLLLARRTDLRRISLDTPDFTDIVLQLEDIR
HAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSASQFVVTAQIAHPDGIAVDWVARNLYWT
DTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSD
RVVLVNTSLGWPNGLALDYAESKIYWGDAKTDKIEVMNADGSSRRVLVEDKLPHIFGFTL
LGDYIYWTDWQRRSIERVHKRTAEREIIIDQLPDLMGLKATNVHQIIGANPCAEDNGGCS
HLCLYRPQGPRCACPIGLELISDMRTCIVPEAFLLFSRRADIRRISLETNNNNVAIPLTG
VKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLY
WADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDG
SERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLDREVIADDLPHPFGLTQ
YQDYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQAGWNECASSNGHC
SHLCLAVPVDGFVCGCPAHYSLNSDNRTCSAPTTFLLFSQKNAINRMVIDEQQSPDIILP
IHSLRNVRAIDYDPLDKQLYWIDSRQNIIRKAQEDGSQSLTVVTSPVPNQNVDMQPYDLS
IDIYSRYIYWTCEATNVINVTHLDGRPIGVVLKGEDDRPRAIVVNPEKGYMYFTNLQERS
PKIERAALDGTEREILFFSGLSKPIALALDSQLSKLFWADSELRRIESSDLSGANRIVLE
DSNILQPVGLTVFENWLYWIDKQQQMIEKIDMTGRERRTKVQARIAQLSDIHAVKELNIQ
EYRQHPCSQDNGGCSHICIVKGDGTTRCSCPVHLVLLQDELSCGEPPTCSPQQFTCFTGE
IDCIPVAWRCDGYTECEDHSDEKNCPVCSDSQFQCESGQCIDSTLRCNGEANCQDNSDEK
NCEVLCLTDQFRCASGQCIGKNKKCDHNLDCSDSSDEQGCYTTEEPAPQASNTIGSIIGV
ILTVFVVGAMYFICQRVLCPRMKGDGETMTNDYVVHGPASVPLGYVPHPSSLSGSLPGMS
RKSVISSLSIMAGSSGPPYDRAHVTGASSSSSSSTKGTYFPPILNPPPSPATERSHYTME
FGYSSNSPSTHRSYSYRPYSYRHFAPPTTPCSTDVCDSDYAPSRRVTTAVTKGYTSDLNY
DSEPVPPPPTPRSQYLSAEENYESCPPSPYTERSYSHHLYPPPPSPCTDSS
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atggggcccgggctccggagcctacttctctgcagcttctgcgccctaatgcgagctgca
ccgctgctgctgtatgcaaaccgacgtgatctgcgattggtggatgctgcaaatgggaaa
gaaaatgctacagttgtagtgggtggtttggaagatgcagccgcagtggactttgtgttt
ttccgggggttgatatactggagtgatgtaagcgaagaagccattaagcgaacagaattt
aacaaaactgggagtgtacagaatgtagtcatttctgggcttttgtcacctgatggtttg
gcatgtgattggctgggagagaaactatactggacggattccgaaacaaatcggattgaa
gtttccaatttagatggatctttgagaaaagttttattttggcaagaattggatcagccc
agagcaatagccttagatcctgcaagagggttcatgtattggacagactggggagaagtg
ccaaagatagaacgtgctgggatggatggttcaagccgctccgttataataaacacagac
atttactggccaaatggattgactttggattatgaggaatggaagctttattgggcagat
gctaaactgaacttcatccacaaatcaaacttggatggaactcatcggcaagcagtagtt
aaaggatcccttccacatccttttgctttgacattgtttggggacacattgtactggact
gactggaacactcattctatcttggcctgcaacaagtactctggggaggacctgcgtgaa
atacattccaacattttctctcccatggatatccatgttttcagccaacggaggcagcca
aatgctacaaacccatgtggaagtaataatggtggctgctcccacttgtgtttgatgtct
cctatcaagccgtcttatcagtgtgcttgtcccactggtgtgaaactccttgagaatgga
aagacctgcaaagatggtgccaccgagttactgctcctagcccgcaggacagacttgagg
cgcatttccttggataccccagattttacagacattgtcttgcagctggaggacatccgc
catgccattgctattgactatgatcctgtggaaggatacatctattggactgatgatgag
gtgagggccattcgccgctctttcatagatggctcagctagtcagttcgttgtcacagcg
cagattgctcatcctgatggcattgctgtggactgggttgcccgaaacctttattggacg
gacaccggtactgaccgcatagaggtgacaagacttaacgggactatgagaaagatcttg
atatcagaagacttggaagaaccgagagcaatcgtattggatcccatggttggatacatg
tattggactgactggggagaaattccaaagattgagagggctgcattagatgggtcagac
agagttgtgctggtgaatacttcacttggctggccaaatgggctggccctggattatgca
gaaagcaaaatatattggggagatgcgaaaacagacaaaattgaggtcatgaatgcagat
ggcagtagcaggagagttctggtggaggacaagctgcctcacatctttggattcactttg
ctgggagattacatctattggaccgactggcaaaggcgtagcattgagcgagtgcataag
cgtacagcagaaagagaaatcatcatagaccaacttcctgacctaatgggcttgaaagct
actaatgtccatcagatcattggtgcaaacccttgtgcagaggacaatggtggttgcagc
catctctgtctgtacagacctcagggtcctcgctgtgcctgtcccataggcttggagctg
atcagtgatatgaggacttgcattgtcccagaagctttcctgctcttttctcggagagca
gatatcaggcgaatctctttggaaaccaacaacaacaatgttgccatcccacttacggga
gtcaaagaagcttctgctctggattttgatgtgacagacaatcggatttactggacagat
atctcgttgaagactatcagcagggcatttatgaacggcagtgcactcgaacatgtggtg
gagtttggcttggattacccagaaggcatggcagtagactggctagggaagaacctgtat
tgggccgatactggaacaaatcgtattgaagtgtcaaagctggatggacaacatcgtcaa
gtattggtgtggaaggatctggacagcccccgagcattggcattagaccctgctgaaggg
tttatgtactggactgagtggggtgggaagcccaagattgaccgagctgccatggatgga
agtgaacgtactactttggtaccaaacgtgggacgagctaatgggctaacaattgattat
gctaaaagaagactttactggacagatctagataccaacttaatagaatcttcaaatatg
ctaggccttgaccgtgaggttatagcagatgacttgcctcacccatttggcttgactcaa
taccaggattacatctattggacagattggagccggcgcagcattgagcgagccaacaag
accagcggccagaaccgaaccatcatccaaggccacttggattatgtgatggatatcctg
gtcttccattcttcaaggcaggcaggctggaatgaatgtgcatctagcaacgggcactgc
tcccatctctgcttggcagtgccagttgatggttttgtgtgtggatgcccagctcactat
tccttgaattctgacaacaggacctgtagtgctcctacgactttcctgttgttcagtcag
aagaacgcaattaatcgcatggtgatagatgagcaacagagtccagacatcatactccct
atccacagtctcaggaacgtccgggccatcgattatgaccccctagataagcagctttat
tggattgactctcggcagaacattatccggaaggcacaagaagatggcagccagagcctt
acggtggtgacgagtccggttcccaatcagaacgtggacatgcagccctatgatctgagc
attgatatctacagccgctacatctactggacttgtgaagccactaatgtgattaatgtg
acacacttggatgggagaccaataggcgtggtgctaaaaggagaagatgacaggccccgg
gccattgtggtgaacccagagaaaggatacatgtatttcactaatctgcaagaaaggtca
cccaaaatcgagagggcagcactggatggaactgaacgggagattctctttttcagtggc
ttgagtaaacccatagccctggcccttgacagccaactgagcaagttattctgggctgat
tcagaactccggagaattgagagcagtgacctttcaggggcaaatcgaatagttttagaa
gactccaatatcttgcaacccgttgggctgacggtatttgaaaactggctgtactggatt
gacaagcaacagcaaatgattgaaaaaattgacatgactggtcgagaaagacgtacaaaa
gtccaggctcgtattgcacagctcagtgacatacatgcagttaaagaattaaacatccag
gaatacagacagcatccttgttctcaagataatggcgggtgttcacacatttgtattgtg
aagggtgacggtacaaccaggtgttcttgtccagtgcaccttgttttgcttcaggatgaa
ctgtcctgtggagaacccccaacatgctcccctcagcagttcacctgtttcacgggggag
attgactgcatcccagtggcctggcgctgtgatggatacactgaatgcgaagaccatagt
gatgaaaagaactgccctgtctgttcagactcccagttccagtgtgaaagcggacagtgc
atagacagcaccctccggtgcaatggagaggcaaattgccaggacaactcagatgagaag
aactgtgaagtgctttgtttaaccgatcagttccgctgcgccagtggccagtgcattggg
aaaaacaagaaatgtgatcacaacttggactgcagtgacagctcagatgagcaaggatgc
tacacaacagaggagccagcaccacaagccagcaataccataggttcgatcattggagtg
atcctcaccgtttttgtggttggagcaatgtactttatctgccagagggtgctgtgccca
cgcatgaagggggatggggaaacaatgactaatgactatgtggtgcatggaccagcttcc
gtaccacttggttatgtgcctcacccaagctctctgtcagggtctctcccaggaatgtct
cgtaaatctgtgatcagctccctcagcattatggccggaagtagcgggcctccctacgac
agagcccatgtcacgggggcatcctccagtagttcttcgagtaccaagggcacttacttc
cctccaattttgaaccctccaccatcaccagctaccgaacgctcacattacaccatggaa
tttggttattcttcaaacagtccttccactcatagatcctacagctacagaccatacagc
taccggcattttgcacctcccaccactccctgcagcacggatgtttgtgacagcgactac
gcccccagccggcgggtcacgacagcagtgactaagggctacaccagtgacttgaactat
gattccgagcctgtgccccctccaccgacgccaaggagccagtacctctcggcggaggag
aactatgaaagctgtccgccctccccatacacagaacggagctattcccatcacctttac
ccaccacctccgtccccctgcacggactcctcatga
DBGET
integrated database retrieval system
