Chelonoidis abingdonii (Abingdon island giant tortoise): 116838093
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Entry
116838093 CDS
T07367
Symbol
PTCHD1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cabi04990
]
116838093 (PTCHD1)
Domain-containing proteins not elsewhere classified [BR:
cabi04990
]
Other domain-containing proteins
Patched domain-containing proteins
116838093 (PTCHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
116838093
NCBI-ProteinID:
XP_032658985
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MVLPRLRESFRSHLALLSSLCTRMLRQVLHRGLRTSFSRLGHFIASHPVFFASAPVLISI
LLGASFSRYQIEDSVEYLLAPKHSLAKIERNLVNSLFPVNRSKHRLYSDLQTPGRYGRVI
ITSFRKANMLDQHHTDLILKLHSAVTRIQVQRPGFNYTFAHICILNNDKTCIVDDIVHVL
EELKSARSSNQTNFVITYPITHLKDGREVYNGHQLGGVTVHSKDRVKSAEAIQLTYYLQT
INSLNDMVAEKWESIFCDTVELFQKSNRKVRMYPFTSSSLREDFQKTSRVSERYLTTSLV
LVVTLAILCCSMQDCVRSKPWLGLLGLLTVSLATLTAAGIINLTGGKYNSTFLGIPFIML
GHGLYGTFEMLSSWRKTREDQHVKERTAAVFADAMLSFSLTTAMYLVTFGIGASPFTNIE
AARIFCCNSCIAIFFNYLYVLSFYGSILVFTGYIENNYQHSIFCRKVPKPEVLQEKPAWY
RFLLTAKFSEDTTDSEETNTYESHLLVCFLKRYYCDWITNTYVKPFVVLFYLIYISFALM
GYLQVNEGSDLSNIVATATRTIEYTTAQQKYFSNYSPVIGFYIYESIEYWNTSVQEDVLE
YTKGFVRISWFESYLNYLRKLNISTGLPKKNFTDMLRNSFLKTPQYAHFSEDIIFSKKYN
NEVDVVASRMFLVAKTMETKREELYDLLETLRKLSLTSKVKFIVFNPSFVYMDRYTSSLG
APLQNSCISALFLLFFSAFLVADSLINVWLTLTVASVEFGVIGFMTLWKVELDCISVLCL
IYGINYTIDNCAPLLSTFILGKDFTRTKWVKNALEVHGVAILQSYLCYIVGLIPLAAVPS
NLTRTLFRCLFLIALVTFFHCFAILPVLLTFVPPSKKKRKEKKNPENREEIECVEMVDMD
STRVVDQITTV
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggttttgcctcggctgcgggagagcttcagatcgcacctcgccctcctgagctccctc
tgcactaggatgttgcggcaggttttgcacagggggctgaggacgtctttttccagactc
ggccacttcattgccagtcacccggtgttcttcgcctccgcacctgtgctgatctcgatt
ttgctgggcgccagcttcagcaggtaccagatcgaggacagcgtggagtatctcctggcc
cccaaacacagcctggccaagatcgagaggaacctggtcaacagccttttcccggtcaac
cgctccaaacaccggctctactctgacctgcagacccctgggaggtacggaagggtcatc
atcacatccttcaggaaggcgaacatgctggaccaacatcatactgatctgatcttaaag
ttgcactcagctgtgaccaggatccaagtacaaagacctggtttcaattacacatttgcc
catatatgtatcctgaataatgacaagacttgcatagtggatgacatagtgcatgtactg
gaggagctaaagtctgctcgatcttctaatcaaactaattttgttatcacatatccaatc
actcacttaaaggatggcagggaagtgtataatgggcaccagcttggcggggttaccgtg
cacagcaaagatcgggtgaagtctgcagaagccatccagctcacctactacttgcagacg
atcaactctctgaatgacatggtagcagaaaagtgggaatccatcttttgtgacactgtc
gaacttttccagaaatccaacaggaaagtcagaatgtatcccttcacttcgtcttcgctg
agggaggatttccagaagacgagcagggtatcagaacgttacctgaccacaagcctagtc
cttgtggtcactttggccatactctgctgttccatgcaggattgtgtccgcagcaaacct
tggcttggccttttaggattgttaacggtgagcttagccaccctgactgcagctggaatc
atcaatctgactggtgggaaatacaattccaccttcctgggaattcccttcatcatgtta
ggtcatgggttatatgggacttttgaaatgttgtcctcctggaggaaaactagagaagac
caacatgttaaagagagaactgcagctgtgtttgcagacgccatgctctccttttctctc
accactgccatgtacctggtcacttttggaataggtgccagccccttcactaacattgaa
gcagcaaggattttctgctgcaattcctgtatcgcaattttcttcaactacctctacgta
ctctccttttatggttccatcctggtatttactggctacatagaaaacaactaccagcat
agtatcttctgcagaaaggtaccaaagccagaggtattgcaagagaagcctgcatggtat
aggtttcttctgacagccaaattcagtgaggacacaaccgattcagaggaaacaaatact
tatgaaagtcatcttttggtgtgtttcctcaaacgctattactgtgactggataacaaac
acttacgtcaagccttttgtagttctcttttaccttatttatatttcctttgccttaatg
ggctacctgcaggtcaatgaagggtcagaccttagtaacatcgtagcaaccgcgacacga
accattgaatacactactgcccagcaaaagtatttcagtaactacagcccagtcattggg
ttttatatctatgagtcaatagaatattggaacacaagcgttcaagaagatgtgctagag
tatactaaagggtttgtgaggatatcttggtttgagagctatttaaattatcttaggaaa
ctcaacatatctactggattgcccaaaaagaattttactgacatgttgaggaactctttc
ctgaaaaccccccagtatgcccatttttcagaggatatcatcttttccaagaaatacaac
aacgaagttgatgtagtagcttcaagaatgttcttggtggctaagacaatggaaaccaag
agagaagaactctatgatctcctggaaaccttgaggaaactctctctcacatccaaggtg
aaattcatcgttttcaatccatcattcgtgtacatggatcgttacacctcatcgctggga
gcccccttacaaaattcctgcatcagtgctttatttctgctcttcttctcagcattcctg
gtggcagactctctaatcaatgtctggctcactctaactgttgcctcagtcgaatttgga
gtcataggtttcatgaccttgtggaaagtggaactggactgtatttctgtgttgtgctta
atttatgggattaattatacaattgacaattgtgcgccactgttatcaacctttatcctg
ggcaaagatttcacaagaactaaatgggtaaaaaatgccctagaagtgcacggggtagct
attttacagagctacctctgctatattgttggtctgattcctcttgcagctgtgccttca
aatctgacccgtacactgttcaggtgcttgtttttaatagcattagtcaccttctttcac
tgctttgccattttacctgtgctactgacttttgtgccaccatccaagaaaaaaaggaaa
gagaagaagaatcctgaaaatcgtgaggaaatagagtgtgtcgaaatggtggatatggat
agtacccgagtggttgaccaaattacaacagtttga
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