Chelonoidis abingdonii (Abingdon island giant tortoise): 116838357
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Entry
116838357 CDS
T07367
Symbol
LAMA2
Name
(RefSeq) laminin subunit alpha-2 isoform X1
KO
K05637
laminin, alpha 1/2
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04510
Focal adhesion
cabi04512
ECM-receptor interaction
cabi04518
Integrin signaling
cabi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116838357 (LAMA2)
04518 Integrin signaling
116838357 (LAMA2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116838357 (LAMA2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
116838357 (LAMA2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
EGF_laminin
Laminin_G_2
Laminin_B
Laminin_N
Laminin_I
EGF_LMN_ATRN
ConA_2nd_BAM2
Laminin_G_3
Tropomyosin
Motif
Other DBs
NCBI-GeneID:
116838357
NCBI-ProteinID:
XP_074920036
LinkDB
All DBs
Position
3:102233340..102724314
Genome browser
AA seq
3228 aa
AA seq
DB search
MARGSLGLLLLLSALAGRCSSQAEQQQQQQQTPPPPQRRGLFPAVLNLAANAIITTNATC
GEKGSEMYCKLVEHVPGQPARNPPQCRICDQNSRIPHQRHPITNAIDGKNTWWQSPSIQN
GIEYHYVTITLDLQQVFQIAYVIVKAANAPRPGNWILERSLDGVNYQPWQYYAVTDTECL
TRYNIHPRRGPPSYAKDDEVICTSFYSKIQPLENGEIHTSLINGRPSADDPSQVLLEFTS
ARFIRLRFQRIRTLNADLMMFAHKDPSEIDHIVTRRYYYSVKDISVGGMCICSGHARACP
LDPATNRSTCQCEHNTCGESCDHCCPGFNQKPWRAGTFLVKSECEECNCHGKTKECYYDE
NIADRNQSLNIHGEYTGGGVCINCTHNTAGINCETCTDGYFRPKGVLPDDPNPCQPCSCD
PVGSLHATCVKDEKHVKGGMLPGFCHCKTGYAGKSCNRCALGYKGYPDCVSCSCSVKGSL
NEDPCIGSCICKENVEGENCDRCKPSFFNLQQDNPRGCEECFCSGKTNVCIDSHWTYSSV
GDMNGWYLTDVPGLLRVTPQQDSFDGPQRLSISNVAARRVLPLIYYWSAPSPYLGNKITA
VGGHLKFTVSYELTGQEEAVQTILESDIIIEGAGLRISTSKEGIHLQPFEEHTEEVVLKP
DLFTVHGTDSPVSKREFMTVLANIKRLLIRATFSYGIAAIYRLSGVSLEAADRYSTGRKV
ASGVEVCQCPPGYGGTSCESCWPRHRRVNGTIFGGICEPCTCFGHADFCDDITGECIDCK
YNTGGPYCDRCLPGFYGDPTKGTNEDCQLCACPLTIPSNNFSPTCHLDRSHGLICDECPP
GYAGPRCERCADGYFGQPLIPGGSCRPCQCNDNLDFSSPGSCDSLSGACLICKPGITGQY
CEKCADGYFGDALDLKNCQSCQCNINGSFSEICNSQTGQCECKPNVVGRRCDECKPNYLW
APEKQFCIPCGCSPLRSMSLRCDMSGRCICKSGFMGKRCELSRQVHKRKENPRATQQIQV
PSQRWGFTGTSGCPRGAYRPVDLPGTFGLQSSRGCVPCNCNSFGSKSFDCDENGQCHCQP
GVAGKKCDRCAHGFYNFEEGGCTPCECSHLGNNCDPVTGRCVCPPNTIGEKCDKCAPNYW
GHDIVSGCKACDCSMVGSLSFQCNLDTGCCSCHPKFSGDKCTQCRPGYWKYPQCIPCDCL
LAGTDPQTCDAETEQCSCVDGTGQCSCKVNVEGVRCDRCRSGMFGLYAKNPLGCNSCYCF
GLTTQCSEAKELIRMWLTLKPEQMVLPLVDENLQDSTTRGVVFQHPEIVANIELVMQDLQ
SEPIYWKLPEQFEGRKLTAYGGKLKYAIYFEAREETGFATYNPQVIIRGGPPTSTRTIIR
HMAAPLIGQLTRHELEMTEHEWRYHGDDPRISSTVTREDFMDVLYNVHYILIKASHGSIM
RQSRISEISMEVAEEGNVSGMSRRAHLIEKCDCPVGYSGLSCEACSPGFYRLPSRSSGRR
PGPTLGTCATCQCHGHSNMCDPETSICQNCRHNTAGDHCERCAVGFYGNVRGSPEDCRPC
ACPLTIPSNNFSPSCVAEGLSDYRCTACPPGYEGQYCERCSPGFSGDPRTPGGSCQECEC
DPYGSLPIPCDPVTGQCTCKPESTGWTCAGCKHQHVRDGMECIFCDDECIGLLLSDLDRL
NQMTLSVNLSGPLPPPYKMLYGFENTTQELKHLLSPQRAPERLLHLAQKNLDTLVTEMDE
LLTRATKVTADGEQTGQDAERTNERATSLGQFIKNTLQAAEAVNENAVKLNETLRIQDKT
LEKSLQALQSDIDRMMRELRRRKLNVQERAAQDELENAEALLNKVKKLFGEPREKNEELK
NEVRNKMADYKNKVDDAQELLREASSKIREANHLSAINQRNMTVIEKRKQAVESSRQEAK
KTLNEGNDILDEASRLANEINLAVEYVENFGDKIQPITDELKDKIDNLSQDIQDRMLPEK
VLQAENHAAQLNESSAILDGILAEAKNLSFNATVAFKAYSNIKDYIDEAERIAREAKARA
NEAMQLASGPQGSLKDGAKNSLQKSFRVLNEAKKLENDVKENGDNLNSMQNRLKNADEKN
SDLLRALNDTFGKLAAIPNDTAAKVQAAKDKAGQANTTANDVLARIKDLNQNLLGLKNNY
SKLADDVAKTNAVVKDSTKNIADADATVKTLEKEADRLLDKLKPIKELQDNLGKNISQIK
ELINQARKQANSIKVSVASGGDCIRTYRPEIKKGSYNTVIVNVKTAVADNLLFYLGSAKF
TDFLAIEMRKGKVNFLWDVGSGVGRVEYPDLTIDDAFWYRIEASRTGRNGTISVQALEGP
KATIMPSTFSAASPPGYNILDVDANAVLFVGGLTDKIKKSDAVRVTTFTGCMGETYLDSK
PIGLWNFRDTKGDCKGCAISPQVPDSEGTVQFDGDGYALVSRPVRWNPNVSMVMFKFKTF
SSSALLMYLATHDLKDFMSIELSDGHIKVSYDLGSGTTSAIGNQNHNDGKWKSFTLSRIQ
KQANVSIVDIDTNQEEIIATSSTGSHFGLNLKADEKIYFGGLPTLRNLRPEVNLKKYAGC
LKDIEISRTPYSILSSPDFVGITKGCTLENLYTVSFLRPGFMELQPVSFDMGTEINLSFS
TKNESGVILFGTAGTPIPPRRKRRQTGQAYYAVFLNKGRLEVHISTGIRDPRRITIRPES
GDFHDGREHSIRIERIKGMFTVQVDEDRSQTQRLPTDQSITVKKLFVGGTPPYFQVAPIR
NIPPFEGCIWNLVINAIPMDFAQPVSFKNADIGQCRTLESEIRFPEGEDEDEATPASVLI
QPEPDGKEEKESTTATPRFSSSPLPPPSPSPPTHDSCAADIVPAVLEGGKQFGLSRNSHI
AAAFDDTKVKNRLTIEFEVRTEAESGLLFYMARINHADFATVQIKNGLPYFSYDLGSGNT
STMIPNKINDGQWHKVKIFRTKQEGILLVDGVSNRTTSPKKADILDVVGMLYVGGLPINY
TTRRIGPVTYSIDGCIRNFKMMEASVDLDNPTSSFNVGKCFINAEKGTFFDGTGFAKTVG
TYKVGTDLLVEFEFRTTRMNGVLLGISSQKMDGLGIELVDEKLMFHVDNGAGRFSAIYEP
DKPGSLCDGQWHKVTANKIKHRLELIVDGNQVDGSSPNGVSSSADTNDPVFIGGYPDGLN
QFGLTTNIRFKGCIRLLKLTKGTGKPQEISFSKALELKGVQPLSCPAN
NT seq
9687 nt
NT seq
+upstream
nt +downstream
nt
atggcacggggaagtctgggtctcctcctgctcctcagcgcgctggccggccggtgcagc
agccaagctgagcagcagcagcagcagcagcagacgccgccgccgccgcagcgaagagga
ttatttccagcagtgctgaacctggctgccaatgctatcatcacaaccaatgctacctgt
ggagaaaaaggctctgaaatgtattgcaaactagttgaacatgtacctggacaaccagca
agaaaccccccacagtgtcgtatttgtgaccagaacagtaggattccacatcaacgacac
ccaataactaatgcaattgatgggaagaacacttggtggcagagtcccagtatccaaaat
gggatagaatatcattatgttaccattacattggaccttcaacaggtattccagattgca
tatgttattgtgaaagcagctaatgcccctcgacctgggaactggattttggagcgttca
ctggatggtgttaactatcagccatggcagtattatgctgtaacagacacagaatgcttg
acacgttacaacattcatccgcgcagagggcctccatcctatgcaaaagatgatgaagtt
atatgcacttcattttactccaagatccaaccactggagaatggagagattcacacatca
ttgatcaatggacgacctagtgctgatgatccttcccaagtattgctggaattcacctca
gctcgctttattcgactgaggtttcagaggatacggacactgaatgctgatttaatgatg
tttgcacacaaagatcccagtgaaattgaccacatagttacaaggaggtattactattct
gtaaaagatatatctgttggaggcatgtgtatctgttctggccatgcaagggcttgtcct
ttggatccagcaactaacagatcaacttgtcaatgtgagcacaacacatgtggagaaagt
tgtgatcattgctgtcccggttttaatcaaaagccctggcgagctgggacattcctggtc
aaatctgagtgtgaagaatgcaattgtcatgggaagactaaggaatgttactatgatgag
aatattgcagacagaaatcagagtttgaatatccatggagaatacactgggggtggagtg
tgtattaattgtacacacaacactgcaggcataaactgtgagacctgcactgatggctac
ttcaggccgaaaggggtattaccagatgaccctaacccgtgccagccatgttcctgtgat
ccagttgggtctttacatgctacttgtgtcaaggatgagaaacatgtgaaaggaggcatg
ctccctggattttgccactgcaagactggctatgcaggtaaaagctgcaatcgatgtgca
ttgggttacaagggttatcctgactgcgtgagctgtagctgctctgtgaaaggcagcttg
aatgaagacccttgtataggatcctgcatttgcaaggaaaacgttgaaggagaaaactgt
gatcgttgtaaaccaagtttcttcaacctgcagcaagataatcccagaggctgtgaggag
tgtttttgttcagggaaaacaaatgtctgtatagactctcactggacctacagcagtgta
ggagacatgaatggctggtatctgactgatgtacctggtctccttcgagttacacctcag
caggacagttttgatggacctcagcggcttagcatcagtaatgtggctgccagaagagtg
ctgccgctgatttattactggagtgcacccagtccttatctgggcaacaaaataacagct
gttggagggcatctgaaatttaccgtctcctatgagctcacagggcaggaagaagctgtt
caaacaatactggagtctgatatcatcatagagggagctggcttaagaatcagcacttca
aaggagggcattcacctgcagccatttgaagaacacactgaagaagttgtgctgaaacca
gacttatttactgtgcacggcactgactctccagtcagcaaaagggaattcatgactgtg
ctggcaaatataaagaggctcctcataagagccacattcagctatgggatcgctgccatc
tacaggttgagtggggttagccttgaagctgctgatcgctattcaactggtaggaaggtg
gcgtctggtgtggaggtttgtcagtgtcctccagggtatggtggtacctcctgtgaatct
tgttggcctagacacagacgagtgaacggcactattttcggtgggatctgtgaaccatgc
acatgctttggtcatgcagacttctgcgatgacatcacaggagaatgcatagactgcaag
tacaatacaggtggcccatactgtgatagatgtcttcctggtttctatggcgatcctact
aaagggacaaatgaagactgccagttgtgtgcctgcccattaactataccttctaacaac
tttagcccaacatgtcatttagaccgaagtcatggattaatatgtgatgaatgccctcct
ggctatgcaggaccacgctgtgagaggtgcgcagacggctattttggacaacctttaata
ccaggaggatcatgccggccctgccagtgtaatgacaaccttgacttttccagtcccggc
agctgtgacagcttatctggagcttgcctgatatgtaaacctggtataacaggtcaatac
tgtgaaaagtgcgctgatggatattttggagatgctcttgatctaaagaattgtcaatcg
tgtcagtgcaacatcaatggctcattctcagagatctgcaactctcagacagggcagtgt
gagtgcaagcccaatgttgtggggcgtcgctgtgatgagtgtaagcccaactatttgtgg
gccccagaaaagcaattctgcataccttgtggctgcagtcctttaagatccatgtcactg
cgctgtgatatgtcggggagatgcatctgcaaatcaggattcatgggtaaacgctgtgag
ctcagcagacaggtgcataaacggaaagaaaatccacgggccactcagcaaatccaagtc
ccttctcagagatggggcttcactggtaccagcgggtgcccccggggtgcttacaggcct
gtcgatttgcctggaacatttggtcttcagtcgtctagaggatgtgttccctgtaactgc
aattcttttggttccaaatccttcgactgtgatgagaacggacagtgccattgccagcct
ggcgtagcaggaaagaaatgtgatcgctgtgctcacggattttacaactttgaagaggga
ggatgcactccttgtgagtgttcccaccttggtaataattgtgatccagtcactggccgc
tgtgtgtgccctcccaataccataggagagaagtgtgataagtgtgcaccaaattactgg
ggtcatgacattgtcagtgggtgcaaggcctgtgactgcagtatggttggatccctcagt
ttccagtgtaacctagatacagggtgctgctcctgccaccctaaattctctggggacaaa
tgcacgcagtgcagaccgggatattggaagtacccacagtgcattccctgtgactgcttg
ctggcagggactgatcctcagacttgtgatgcagagacggaacaatgttcatgtgttgat
ggtacagggcaatgtagctgcaaggttaacgtggaaggtgtccgttgtgacaggtgcagg
tctggaatgtttggactctatgccaaaaacccacttggctgcaacagctgctattgcttt
ggcctgactactcagtgcagtgaggcaaaggagctgatccgcatgtggctgaccttgaag
ccggaacagatggttctgccactggtagatgaaaaccttcaggacagtactaccagaggg
gttgtattccaacatccagagatagtagctaacattgaactggtgatgcaagatctccaa
tcagaacctatttactggaaacttccagagcagtttgaaggccgaaagctgactgcctat
ggagggaaactgaaatatgctatctactttgaagcacgcgaagagacgggttttgctacc
tataatccccaggtcatcatcagaggtgggcctcccacaagtactagaactatcatccga
catatggctgcccctttgattggtcagctgacaagacatgagctagagatgacagagcat
gaatggagatatcatggtgatgacccaagaattagtagtactgtgacacgtgaggacttc
atggatgtgctgtacaacgttcattacattcttattaaggcttctcatggcagtatcatg
agacaaagcagaatttctgagatatcgatggaagttgctgaagaaggcaatgtgtctgga
atgagtcgtcgtgctcacttgattgagaaatgtgactgcccagtgggctattctggcttg
tcatgtgaggcatgttctccaggattttatagactgccttctagatcatctggcaggaga
cctggcccaaccctgggcacctgtgccacatgtcaatgccatggacatagtaatatgtgt
gacccggaaacctccatatgtcagaactgcaggcataacactgctggcgatcattgtgag
aggtgcgcagttggattctatgggaatgtccgaggatctccagaggactgccgtccttgt
gcgtgtcctctgaccattcccagcaacaactttagcccttcttgtgttgcggaaggtctc
agtgattaccggtgtaccgcttgcccacctggatatgaaggccagtactgtgaaagatgt
tcccctggcttctccggtgacccaagaactccaggagggtcctgccaagaatgtgagtgt
gatccgtacggttcactgcctatcccctgtgaccctgtcaccggacagtgcacctgcaaa
cctgaatccacagggtggacttgtgcaggctgcaagcaccagcatgtgcgtgatggcatg
gagtgcattttttgtgatgatgaatgcataggactccttctaagcgacttggatcgacta
aaccagatgactctgagtgtcaatctcagtggcccgctgcctcctccatataaaatgctg
tatggctttgagaacacaactcaggaattaaagcatttgctatcacctcagcgagcacca
gagagactccttcacttggcacaaaaaaacctggataccctcgtgacagagatggacgag
ctactgacaagagctaccaaggtgacggcagatggagaacaaacagggcaggatgctgag
aggactaatgagagagccacgtctcttggacagttcatcaagaacacactccaggctgcg
gaagctgtaaatgaaaatgctgtaaaactgaatgagacactccgaatccaagataagacc
ctggagaaaagtcttcaggctctgcagagtgatattgatagaatgatgagagaactgagg
agaagaaagttgaacgtgcaagaaagggcagcccaagatgagttagaaaatgcagaagcc
cttttgaacaaagtgaagaaattatttggagagcccagagagaaaaatgaggagctcaag
aatgaggtccggaacaagatggcagattacaaaaacaaggttgacgatgctcaagaactg
ctgagagaagccagtagtaaaattagggaagccaatcacttatctgcaatcaaccaaaga
aacatgacagtgatagagaaaaggaagcaagctgtagaaagtagcagacaagaggccaaa
aaaacactaaacgaggggaatgacatcttggatgaagccagccgtcttgcaaatgaaatc
aatttagctgtggagtatgtagaaaacttcggggataagatacaaccaatcactgatgag
ctgaaggataaaatagacaatctctcccaagatattcaggataggatgcttccagaaaag
gtgttgcaggctgagaaccatgcagcccaactgaatgaatcatctgcaatactggatgga
atccttgctgaagctaaaaacctctcattcaatgccactgtagctttcaaggcatatagc
aatatcaaggactatattgatgaagcagagagaatcgccagggaggccaaggcccgtgca
aatgaagctatgcaactggcatctggtcctcaaggatcactgaaggatggtgccaagaac
tcacttcagaaaagcttcagggttcttaatgaggccaagaagttagaaaatgatgttaaa
gaaaatggggataacttgaatagtatgcagaacaggttgaaaaacgctgatgaaaagaat
tctgatctcctgagagctttgaatgacacctttggaaagctggcagccattcctaacgat
acagctgcaaaagtgcaagcagctaaagataaagctggacaagctaacaccactgcaaat
gatgtactggctaggattaaagacctcaaccaaaacctccttggcttaaagaacaactac
agcaaattagcagatgatgtggccaaaacaaatgctgttgtgaaagattccaccaagaac
attgctgatgcagatgccactgtaaaaaccctagaaaaagaagcagatcggctactggat
aaactcaaaccaatcaaagaacttcaggataatttggggaaaaacatctctcagataaaa
gaactgataaaccaagcccggaaacaggccaattctatcaaagtctctgtggcttctgga
ggtgactgcattcgcacgtacagaccggaaataaagaaaggaagctacaacactgtcatt
gtcaacgtgaagacagcagtagctgacaaccttcttttttatcttggaagtgccaaattt
actgacttcttggccatagagatgcgtaaaggcaaggtgaacttcttgtgggatgtggga
tctggcgttggacgagttgagtatccagatctgaccatcgatgatgcattttggtaccgg
attgaagcctctaggactggaagaaatggcacaatttcagtacaagctctggaaggtccc
aaagcaaccatcatgccaagtaccttcagcgcagcctctccacctggttataatattctg
gatgtagatgcaaatgctgtgttgtttgttggtggtctaactgataaaattaagaaatca
gatgctgtaagagtcactaccttcactggctgcatgggtgaaacttacttggacagcaag
cccataggactgtggaatttcagggacacaaagggtgactgcaaaggatgtgctatcagc
ccacaggtgccagacagtgagggaactgttcagtttgatggagatggttatgctttggtg
agccgcccagtccgctggaaccccaatgtttctatggtcatgttcaagttcaagaccttc
tcttccagtgctctgctgatgtaccttgctacacatgacttgaaagatttcatgagcata
gagctcagtgatgggcatataaaagtcagctacgatctaggttcaggtacaacttctgct
attggcaaccaaaaccataacgatgggaaatggaaatcgttcaccctctcaagaatccaa
aaacaagccaatgtatcaattgtagacatagacaccaatcaggaagagatcatagcaaca
tcttctacaggaagccattttggtctcaacttgaaagctgatgagaaaatatattttggt
ggattgcctactcttagaaacctgaggcctgaagtgaacttaaagaaatatgcaggctgc
ctcaaagatattgaaatttcacgaacaccatatagtatactgagcagccctgattttgta
ggcataaccaaaggatgcacactggagaacctttacacagttagcttcctcagaccaggt
tttatggaactgcagccagtctcatttgacatgggtacagaaatcaacctgtcctttagc
accaagaatgagtctggggtcatcttatttggcacagcagggacacctatacccccaagg
agaaaacgcagacagactgggcaggcctattatgcagtgttcctgaataaaggtcgatta
gaagtgcatatctccactggaatacgagatccacgcaggatcaccatcagacctgaatcc
ggtgattttcatgatggtagagaacactccatccggatagaaagaatcaaagggatgttt
actgttcaagtagatgaagacagaagccagactcagaggctacctactgatcagtctata
actgttaaaaaactctttgtgggagggaccccaccttactttcaggttgcgcctatcagg
aacatacccccttttgagggttgcatatggaatcttgtcatcaatgccatccccatggac
ttcgctcagcctgtgtccttcaaaaatgcagatataggccagtgtcgcactctggaatcc
gagatcagatttcctgaaggagaagatgaagatgaagctacccctgcttctgtcttgatc
cagcctgaacctgatggtaaagaggagaaagagagcacaactgccacccccaggttttct
tcctctcctcttccaccaccatcaccttcacctcctacacatgactcgtgtgccgctgat
atagtgccagctgttttggagggtggcaaacaatttggtctttcaaggaacagccatatt
gcggcagcatttgatgataccaaagtgaagaacaggctcacaattgaatttgaagtccga
acagaggctgaatctggcttgcttttttatatggcccggatcaaccatgctgattttgcc
actgttcagataaagaatggactgccttacttcagctatgacctgggaagtgggaacacc
agcacaatgattccaaacaaaatcaatgatggccagtggcacaaggtaaaaatatttcga
accaagcaagaaggaatccttttagtagacggtgtttcaaacaggaccaccagtcccaag
aaggccgatatcttggatgttgtgggaatgctgtatgtcggaggattgcccattaactat
acaacacgaagaattggtccagtcacctacagcattgatggttgcatcagaaattttaag
atgatggaggcttctgttgacctggataatccaacttccagcttcaatgttggcaaatgc
tttatcaatgcagagaaaggaacattctttgatggaacaggctttgccaaaacagttgga
acatataaagtgggaacagatttactagtggagtttgaattccgtactactcgaatgaat
ggtgttctgctgggaatcagcagccaaaaaatggatggactcggtatcgagctggtagat
gaaaaactgatgttccatgtggataatggcgcaggcagattctctgccatctatgagcct
gacaaaccaggcagcttgtgtgatggacagtggcacaaggttactgcaaacaagatcaag
caccgattagaattaattgtggatgggaatcaggtggacggaagcagcccaaatggagtc
tccagttctgcggacactaatgatcctgtcttcattggaggatatcctgatggtctgaac
cagtttggcctgactacaaatatccgttttaaaggatgcattcgtttgctgaagctcacc
aaaggcactggtaaaccccaggagattagcttcagcaaagccttggagctgaagggagtt
caacctctatcatgccctgcaaactaa
DBGET
integrated database retrieval system