Chelonoidis abingdonii (Abingdon island giant tortoise): 116838573
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Entry
116838573 CDS
T07367
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03030
DNA replication
cabi03410
Base excision repair
cabi03420
Nucleotide excision repair
cabi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116838573 (RFC4)
03410 Base excision repair
116838573 (RFC4)
03420 Nucleotide excision repair
116838573 (RFC4)
03430 Mismatch repair
116838573 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cabi03032
]
116838573 (RFC4)
03036 Chromosome and associated proteins [BR:
cabi03036
]
116838573 (RFC4)
03400 DNA repair and recombination proteins [BR:
cabi03400
]
116838573 (RFC4)
DNA replication proteins [BR:
cabi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
116838573 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
116838573 (RFC4)
Chromosome and associated proteins [BR:
cabi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
116838573 (RFC4)
DNA repair and recombination proteins [BR:
cabi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
116838573 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
116838573 (RFC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_assoc_2
AAA_22
AAA_11
AAA_16
AAA_30
DUF815
AAA_28
Mg_chelatase
AAA_5
AAA_24
AAA_14
SLFN-g3_helicase
RuvB_N
AAA_23
AAA_19
AAA_3
ResIII
bpMoxR
AAA_7
Viral_helicase1
nSTAND3
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
116838573
NCBI-ProteinID:
XP_032659778
Ensembl:
ENSCABG00000013097
UniProt:
A0A8C0H4Q7
LinkDB
All DBs
Position
Unknown
AA seq
366 aa
AA seq
DB search
MQAFLKGPFSVSTKAPASKERGAAAAAAGGSDEGKRLKPIPWVEKYRPKCVDEVAFQEEV
VAVLKKSLEGADLPNLLFYGPPGTGKTSTILALARELYGPELFRQRVLELNASDERGIQV
IREKVKTFAQLSVSGSHSDGKVCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCL
ICNYISRIIEPLTSRCSKFRFKPLTDKIQEQRLWAVSGKENVKVSNEAISCLVQVSEGDL
RKAITFLQSATRLTGGKEITEKVVTEIAGVVPKETIDGLLSACQSGSFEKLETVAKNLIN
EGYAAAQLVNQLHDDIVEREDLTDKQKSVIAEKLAEVDKCLTDGADEYLQLISLCAVVMQ
QLTQNG
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgtttctgaaaggcccgttctccgtcagcaccaaagcgcccgcatccaaggag
cgaggggcggcggcggcggctgcaggcggcagcgacgagggcaagagactcaaacccatc
ccttgggtggagaaatatcgtccaaagtgtgtggatgaagttgcattccaagaggaagtt
gttgctgtgctgaaaaaatccttagagggagctgatcttcccaatctcttgttttatggc
ccacctggaacaggaaagacttctactattttggcattagccagagaactctatggaccc
gaattgttccgacagagagttcttgagttaaatgcttctgatgaacgtggaatacaagtg
attcgagagaaagtgaagacatttgctcaactaagtgtgtctggaagtcattcagatggt
aaggtttgtcctccttttaagattgtgatcctggatgaagcagactccatgacttcagcc
gctcaggcagccttgagacgcactatggagaaagaatctaaaactacacgcttctgcctt
atttgtaattacatcagcaggataattgaacccttaacatctcgatgctccaaattccgt
ttcaagcccctgactgataaaatccaagagcagagactatgggctgtttctggaaaggaa
aatgtgaaagttagcaatgaggcaatatcttgtcttgttcaagtgtcagaaggagactta
agaaaagcaatcacatttcttcaaagtgctactcgattaacaggtgggaaagagatcaca
gagaaggttgtcaccgaaattgccggggttgtccctaaggaaacaattgatggactgcta
tctgcctgtcaaagtggctcttttgaaaaactggaaactgtagcaaagaatctgataaat
gaagggtatgctgctgctcagcttgtaaaccagcttcatgatgatattgttgagagagag
gatctcactgacaagcagaaatctgttattgcagagaaacttgctgaggtagacaaatgc
ttgacagatggggcagatgagtacttgcaattgatcagtctctgtgcggttgtgatgcag
cagctaactcagaacggctag
DBGET
integrated database retrieval system
