Chelonoidis abingdonii (Abingdon island giant tortoise): 116838648
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Entry
116838648 CDS
T07367
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04510
Focal adhesion
cabi04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116838648 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116838648 (LAMB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG17_like
F5_F8_type_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
116838648
NCBI-ProteinID:
XP_032659887
Ensembl:
ENSCABG00000016621
LinkDB
All DBs
Position
Unknown
AA seq
1786 aa
AA seq
DB search
MGWLQAHLGALLGLWAAALAQEPEYSYGCAEGSCYPATGDLLIGRASQLSASSTCGLHRP
EPYCIVSHLQEDKKCFTCNSQFPFHETLNPDSHLIENVVTTFAPNRLKLWWQSENGLENV
TLQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKTWKVYRYFAYDCENSFPGISTGP
MKKVDDIICDSRYSDIEPSTEGEVIYRALDPAFRIEDPYSPRIQNLLKITNLRINFTKLH
TLGDNLLDSRMEIKEKYYYAIYDMVVRGNCFCYGHASECAPVDGFNEEVEGMVHGHCMCR
HNTKGLNCELCLDFYHDLPWRPAEGRHSNACKKCNCNGHSIQCHFDMAVYMATGNTSGGV
CDDCQHNTMGRNCEQCKPFYFQHPEREIRDPNICEPCNCDPLGSQNGGICDRYTDFSAGL
IAGQCRCKLFVEGERCDLCKEGFYGLSADNPLGCQSCACNPLGTLPGGNPCDSETGSCYC
KRLATGRHCEQCLPEHWGLSNDMDGCRPCDCDQGGAINNNCSSETGQCQCWPRVIGRQCN
EVESGYYFMSLDHYIYEAEEANFGPGVSIVERQYSQDRTPSWTGIGFVRVPEGAYLEFYV
DNIPYSMEYDVVIRYEPQLPDHWEKAVITVSRPGKIPTSSRCGNTVPDDDNQTVSLSPGS
RYVVLPRPVCFEKGLNYTVRLELSQYSSFDTEVESPYTLIDSLVLMPYCKSLDIFTVGGS
GEDVVTNSAWETFQRYRCLENSRSVVKTPMTDVCKNIIFSISALLHETALSCQCNPQGSL
SSVCDSNGGQCQCRPNVVGRRCDRCAPGTFGFGPNGCKSCECHLQGSVSSFCHPETGQCY
CFHGVYGSQCDRCLPGYWGFPSCQPCQCNGHTDDCDPYTGKCLNCRDSTTGHNCERCLGG
YYGDPVLGSGDHCRPCPCPDGPESGRQFASSCYQDPITLQIVCVCNVGYIGSRCDECASG
FFGHPEERGGVCQPCQCNNNIDMTDPGACDKQSGKCLKCLYQTEGENCQLCKYGYYGPAL
QQDCRKCVCNYLGTVREHCNSSEDCQCEKTTGQCQCLPNVTGQNCDHCAPNTWRLASGTG
CELCECDVARSFGPSCNEFTGQCQCMPGFGGRTCRECQEFFWGDPNVACQACDCDPRGIQ
TPQCNRSTGLCTCKEGVEGPRCDKCTRGYSGIFPDCAPCHQCFALWDVIISELTNRTQRF
LERAKILKISGVSGPYQQTINTMEEKLNEIKSILAQNPAAEPLKNIGNLFEEAGKLTADV
TEKMAEIEDKLSVIALKSNNTDTHLRALEMDAESLDHIVKELAEQLEFIKISDIRGALDS
ITKYFQMSLEAEERVNASTVHPDSLVELSAQTRQEVEDLISEQEAQFKAKQEEQSRLLDE
LAGKLQSLDLSEVAEKTCGTPSGASCADSECGGLNCRTDEGEKKCGGPGCKGLVTVAHSA
WQKAMDFDRDILSALAEVEELSKMVSEAKQRADEAKQNAQEVLLKTNATKEQVDRSNEDL
RNLIKQIREFLMQDSADLDSIEAVANEVLKMEMPSGPQQLQTLTEDIRERVESLSDVEII
LQQSAGDIARAEMLLEEANKASKSAKDVKVTAAIVKEALEEAEKAQNAAEKAIKQAEEDI
RGTQDLITSIESENAASEETLNNATLRLTELEKSVEDLKQKAATNSENVEKIEETIATVK
QNAEEVKEVLDSELHAKYKTVENLIAKKTEESADARKKAGMLQNEAKSLLAQANSKLQLF
KDLESTYENNQKVLEDKAKQLVELEETVRSLLQAISQKVAVYSTCL
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atgggctggctccaggcgcaccttggcgcgctcctagggctgtgggccgccgccctggct
caggagcccgagtacagctacgggtgcgccgagggcagctgctacccggccaccggcgac
ctgctgatcggccgcgcctcgcagctgtccgccagctccacgtgcgggctccacaggccc
gagccctactgcatcgtgagccacctccaggaggacaaaaaatgtttcacgtgcaattcc
cagttccccttccacgagactctcaaccctgatagccatcttattgaaaatgtggtcaca
acatttgctccaaaccgtctcaagctgtggtggcagtcagaaaatggtttagaaaatgta
acactccaactggatctggaagccgaattccatttcactcatctcattatgaccttcaag
accttccgcccagctgcaatgctaatagaaagatcatctgattttggaaaaacctggaaa
gtatatagatactttgcatatgactgtgagaactccttccctggtatttcaactggaccc
atgaagaaagtagatgatatcatttgtgattcccgatattctgacattgaaccttcaact
gagggagaggtcatatatcgtgctttagatccagcttttagaattgaagacccatatagt
ccaagaattcaaaacctattaaaaatcacaaatttaagaatcaatttcaccaagttacat
acattgggagacaacctcttggattctaggatggaaatcaaagaaaagtactactatgcc
atttatgacatggtggttcgtgggaactgtttctgttacggccatgccagtgagtgtgca
ccagtggatggttttaatgaagaggtggaaggaatggtccatgggcactgcatgtgtaga
cataataccaaagggttaaactgtgaactctgtttggatttctaccatgacttaccatgg
agaccagctgaaggacgccatagtaatgcatgtaaaaagtgcaattgtaatggacactct
atccagtgccattttgatatggctgtatacatggcaactggaaataccagtggtggagtg
tgtgatgactgccagcataacacaatgggacgcaactgtgaacaatgcaaaccattttac
tttcagcatccagagagagagatacgagatcctaacatttgtgagccatgtaactgtgac
ccacttggctcccaaaatggtggaatatgtgatcgctacactgacttctctgctggcctt
attgctggacagtgccgttgtaaattatttgtggaaggggaacgttgtgacctctgcaaa
gaagggttctatggattaagtgcagataatccacttggttgtcaatcttgtgcctgtaat
cctttgggaactcttcctggagggaatccttgtgattcagagacaggaagctgctattgt
aaacgtctagcaacaggaaggcactgtgagcagtgtctgcctgaacactggggcctgagc
aatgacatggatggatgtcggccttgtgactgtgaccaagggggagcaataaacaataac
tgctcaagtgaaactggccagtgtcagtgctggccccgtgtgattggacgccagtgcaat
gaagtggagtctggctattacttcatgtcattagaccactatatctatgaggcagaggaa
gccaactttggtcctggagtgagcatagttgagcgccagtattctcaagatcgtactcca
tcctggactggaataggatttgtaagagtccctgaaggggcatatctggaattctatgtc
gacaatattccatattctatggagtatgatgttgtgattcgttatgagccacagttacca
gatcattgggaaaaagctgttattactgtttcacgcccaggcaagattcctacaagtagc
cgatgtggtaataccgttcctgacgatgataatcagactgtgtcattatcacctggctca
agatatgtcgtccttccacgccctgtatgttttgaaaagggactgaattacactgttcgt
ctggagctatcacaatactcctccttcgatacggaggtggaaagcccatacacactcatt
gactctctcgttcttatgccttactgcaaatcgctggacatattcacggttgggggctca
ggcgaagatgtggtcactaacagtgcttgggaaacatttcaaagataccgatgtttggaa
aacagcaggagtgttgtgaaaactcctatgactgacgtctgcaagaatattatttttagc
atctctgcactgttacatgagacagcattatcttgccagtgtaaccctcaaggctcatta
agttcagtgtgtgactctaatggaggacagtgccagtgtcgtcctaatgttgttggaaga
agatgtgacagatgtgctcctggtacctttgggtttggacctaatggatgcaaatcttgt
gaatgtcacttacaaggttctgtcagttccttctgtcatcctgagactggccagtgctac
tgtttccatggagtgtatggtagtcagtgtgatcggtgcttacctggatactggggattt
ccaagctgtcagccttgccaatgtaatggtcacacggatgactgtgacccatacactggg
aaatgtttgaattgccgcgattccaccacaggacacaactgtgaaaggtgccttggtgga
tattatggagaccctgtcctgggatcaggagatcattgtcggccttgtccttgcccagat
ggcccagaaagtgggcgtcagtttgccagcagctgttatcaagatcctattactctgcaa
attgtgtgtgtctgtaacgtgggatacataggaagcagatgtgatgagtgtgcttctggt
ttctttggacaccctgaagagagaggtggagtctgccagccatgccagtgtaacaacaat
attgacatgactgacccaggggcctgtgacaagcagtctggaaagtgcctgaagtgcttg
tatcagacagagggtgaaaattgccagctgtgtaaatatgggtactatggacctgcattg
caacaggattgtagaaagtgcgtctgtaattacttgggaacggtgcgagagcactgcaat
agctcagaagactgtcagtgtgagaaaacaaccggtcagtgccaatgtcttcccaatgtg
accgggcagaactgcgatcactgtgcaccaaacacttggagactggccagtggaactgga
tgtgaactgtgcgagtgtgatgttgctcgttcctttgggccatcatgtaatgagttcact
gggcagtgtcagtgcatgcctgggtttggaggccgcacctgcagggagtgccaggagttt
ttctggggtgaccccaatgtggcatgccaagcttgtgattgtgatccccgtggaatccag
acacctcagtgtaatcgctccacggggctgtgcacctgtaaggagggtgtcgagggaccc
cgctgtgacaagtgcacccgtggatactccggcatcttccctgactgtgcgccatgtcat
caatgttttgctctgtgggacgtcatcattagtgaactgaccaataggacacagaggttc
ctggagagagcaaaaatcctgaaaatcagtggggtcagtggcccttaccagcaaactatc
aacactatggaagagaaactgaatgaaattaaaagtatccttgctcaaaatccagctgct
gagccccttaaaaacattggaaatctctttgaggaagcaggcaagctaacagcagatgtt
acagaaaagatggctgaaatagaagataagctctctgtgatagcgttaaaaagcaataac
acggacactcacctgagggccctggagatggatgcagagagcctagaccacattgtgaaa
gaacttgcagaacaactcgagtttataaaaatctccgatatccggggagccttggatagt
atcaccaaatattttcagatgtccctggaggcagaagagagggtcaatgcctccactgtt
caccctgatagccttgtggaactgtcagctcagacacgacaggaagtggaagacttaatc
agtgagcaagaggcccagttcaaggcaaaacaagaagaacagtcacgccttctggatgaa
ctcgcaggcaagctgcaaagtctggatctttctgaagtggctgagaagacatgtggaact
ccctcaggggcttcctgtgctgactccgagtgtggtggtctgaactgccgaacagatgaa
ggcgaaaagaaatgcggaggaccaggctgcaaggggttggttactgtggctcacagtgcg
tggcagaaagccatggattttgacagagacatactcagtgcattggcggaagttgaagaa
ctctctaaaatggtctccgaggcaaaacagagagcagatgaagcaaaacaaaatgcacaa
gaagttctgctcaaaaccaatgccacaaaagagcaagtggacagaagcaatgaagacctg
agaaaccttattaagcagatcagggaatttctgatgcaggatagcgccgatttggatagc
attgaggcagttgctaatgaagtgttgaagatggagatgccaagtggcccccagcagcta
cagaccctgacagaggatatccgtgagcgtgtggaaagcctttctgatgtagagattatc
ttacaacagagtgccggagacattgccagagctgaaatgctgttagaggaagcaaataaa
gcaagcaaaagtgcaaaagatgttaaagtcactgcagctattgtgaaagaagcactggaa
gaagctgaaaaggcccaaaatgcagccgaaaaggccatcaaacaagctgaagaagatatt
agaggaacgcaggacctaattacctcaattgaatctgaaaatgcagcatcggaagaaacc
ttaaacaacgctaccctacgtcttactgagctagagaagagtgtggaagatcttaaacaa
aaggctgctacaaattcagagaatgtggaaaagattgaagaaaccattgctactgtgaaa
caaaatgccgaagaagttaaagaggtgctggacagtgaactgcatgccaaatataaaaca
gttgaaaacctaattgccaaaaaaacagaagagtctgctgatgccaggaagaaagctgga
atgctgcagaatgaagctaaatccttgttagctcaagcaaacagcaaactccagctgttc
aaggatttggaaagcacatatgagaacaatcagaaagtcttggaagacaaggccaaacag
ttggtggagctagaagaaacagtgcgctccctcttacaggcaatcagccagaaagttgca
gtatacagcacctgcttgtaa
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integrated database retrieval system
