Chelonoidis abingdonii (Abingdon island giant tortoise): 116838782
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Entry
116838782 CDS
T07367
Symbol
AP5B1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cabi03400
]
116838782 (AP5B1)
DNA repair and recombination proteins [BR:
cabi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
116838782 (AP5B1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_N
AP5B1_barrel
AP5B1_C
Motif
Other DBs
NCBI-GeneID:
116838782
NCBI-ProteinID:
XP_032660150
LinkDB
All DBs
Position
Unknown
AA seq
917 aa
AA seq
DB search
MSVRSGDSWAQLITTFRAGPTAFLLAHGSDDTFLAELLQDLSSERISEQTKVSMLTLLLE
FPTLLCPDPEVGEQVAGSLLANFAQLPHSPKLSWLRCHLLVVVGTVLISTEAFGEGSQAS
RDYLSLLLHLASDLNDQRQGPGDRGVRAAACESLRELECCYPGLFSRRLDSLHSMQQQEL
TPVHQGYTLLYSLALRNAVLLLARRGEGALSELLAGNEGLAWEAVGNAGAVSPASLDRLL
LLPTPSETKELKSVLSQLLDGSYLLTPPAQSQLLWHLAQVVCVIRTQSPAIFKAQLVRLF
GTAHVALLHASLQLKGLFTDSLFTAEDEAFLLRRLVGMAQHPSLPSPLKLFYLDCLLHFP
ENRPLGSGSEEGLPVLLTPRLASCLFPSLFNDPGTMLARLNLLSLVCLENQGPEAERGVG
YIFEHVLALADTVAGKGGREATGLFFRATYLFARYFGSRPQLMGELTGTLVGLYRQRCSL
APNLINLLNETQLVLDDPAWTTSLSKALQELTVGMPLLPPWEQELGWHLKLLARVAKESG
VPQGSTLGFLQRLVRLAGAGQLGDWYIGQALLSVCRNLLQHQPPPAMGCQLAELLQDVSL
SYPDVDVQDRARFYYALLSCLSGDKLGAVLAPGGRLKARTLSSSIMADSENFAAALTVHP
APQPLLLLQREAPAKPTLVPVPASQMCPADAQEVKDCCRRLLELHSPAQLNLTYRLLHTG
SSPEQLFCLLLHFERSDNFYEPVPDVCVPCLSATHPSPVLTLHLQPRCPYPTELAVSALY
TTQTGLTYCSQLEPLQVAFPDIFLPLALPVNWDCESRRHLFDTLWSSLCPDGSGDCAESL
FCWPTTQQPLGVLVQAHFASYLVAEEPGTYKIAIALPPHYHVLLQAQETQGAARVTIRTD
NWKVLPHLSAYLQKVVE
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgcggagtggggacagctgggcccagcttataacaaccttccgagcaggcccc
acagccttccttctggcccatgggagtgatgataccttcctggctgagctgctgcaggac
ctgagcagcgagaggatcagtgagcaaaccaaggtctccatgctgacccttctgctggag
ttccccaccctgctgtgcccagaccccgaggtgggcgagcaggtggctggctctctcctg
gctaactttgctcagctgccccattcacccaagctgtcctggctgcgatgccacctactg
gtggtggtggggactgtgctgatctccactgaggcctttggggagggctcccaggcctct
cgtgactacctctctctgctgctgcacctggcctcggacctcaatgaccagcggcagggg
ccgggtgaccgcggggtgcgggcggccgcctgcgagagtctgagggagctggagtgctgc
taccctggcctgttctcccggcggttggactcgctgcactccatgcagcagcaagagctc
acgcctgtccaccagggctatacgctgctgtacagcctggccctgcgcaatgccgtgctg
ctgctggcccgccggggcgagggggctctcagtgaattgctggctggcaacgaggggctg
gcttgggaggcggtggggaacgccggggcagtctctccagcatcccttgaccgcctgctg
ctgctgcccaccccgtccgagaccaaggagctgaagtcagtgctgtcccagctgctggat
ggctcttatctgctgacaccacctgcccagagccagcttctgtggcatctggcccaggtg
gtgtgtgtgatccgcacccagtcacctgccatcttcaaggcgcagctggtacggttgttt
ggaacagcccatgtggcgctgctgcatgccagcctgcagctcaaagggcttttcaccgac
agcctcttcacggctgaggatgaggccttcctcctgcgtcgcctggtgggcatggcccag
catccctcactgccctcgcccctcaaactcttctacctcgactgcctgctgcacttcccc
gagaaccgcccactgggctctggctctgaggaggggctgccagtcctcctcacaccccgc
ctggcctcctgcctcttcccctccctcttcaacgacccgggcaccatgctggcacgcctc
aacctgctgagcctggtgtgcctggaaaaccagggccccgaggctgagcgaggtgttggg
tatatctttgagcatgtcctggcactggcagacaccgtggcaggtaaaggtgggcgtgag
gctactgggctcttcttccgagccacctacctctttgcccgctactttggctcaaggcca
cagcttatgggagagctgacaggcacactggtggggctgtatcgccagcgctgctccctg
gcccccaacctcatcaacctgctcaatgagacccagttggtgctggatgacccagcctgg
accacatccttgagcaaggccctgcaggagctgactgtgggcatgccactgctgccaccc
tgggaacaggagctgggctggcatctcaagctgttggctcgggtggcaaaggagagtggg
gtcccacagggcagtacacttgggttcctgcagcgcctggtgcggctggcaggtgctgga
cagttgggagactggtacattggccaggctttgctgagcgtctgccgcaacctgctgcag
caccagcctccccctgctatggggtgccagctggctgagctgctccaagacgtctcactg
agctacccggatgtggacgtgcaggatcgggctcgcttctactacgcactcctgtcgtgc
ctgtctggggacaagctgggggcagtgctggcacctggggggcgcctcaaagcccggact
ctctcctcctccatcatggcagacagcgagaacttcgccgccgcactgactgtgcaccca
gccccgcaacccctgctgctgctgcagcgtgaggccccagccaagcccaccctggtacca
gtgccagcctcccagatgtgccctgctgatgctcaggaggtgaaggactgctgccgacgg
ctcctggagctgcattctccagcccagctcaacctgacataccggctgctccacacaggg
tcctcacctgagcaactcttctgcctcctgctacacttcgagcgctccgacaacttctat
gagccagtgcctgatgtgtgtgtgccctgcctctctgccacccacccatctcccgtcctc
acactccacctgcagccccgctgcccctaccccaccgagctggcagtgagcgccttgtac
accacccagaccggcctcacctactgcagccagctagaaccattgcaggtggcctttccg
gacatcttcctgcctctggcactgcccgtgaattgggactgtgagagccggcgccacctc
tttgacaccctctggtcctccctgtgcccagatgggtcaggtgactgcgccgagagcctc
ttttgctggcctaccacccaacagcccttgggtgtcctggtacaggctcactttgccagc
tacctagtggcagaggagccgggcacctacaagattgccatagccctgccaccccactac
catgtgctgctgcaagcacaggagacccagggggcagcgcgtgtcaccattcgcactgac
aactggaaggtgctcccccacctgagtgcctacctgcagaaggtggtggagtga
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