Chelonoidis abingdonii (Abingdon island giant tortoise): 116838790
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Entry
116838790 CDS
T07367
Symbol
MUS81
Name
(RefSeq) structure-specific endonuclease subunit MUS81 isoform X1
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03440
Homologous recombination
cabi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116838790 (MUS81)
03460 Fanconi anemia pathway
116838790 (MUS81)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cabi03400
]
116838790 (MUS81)
DNA repair and recombination proteins [BR:
cabi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
116838790 (MUS81)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WHD_MUS81
ERCC4
HHH_8
EME1-MUS81_C
HHH_5
Motif
Other DBs
NCBI-GeneID:
116838790
NCBI-ProteinID:
XP_032660179
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All DBs
Position
17:11029818..11038978
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AA seq
597 aa
AA seq
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MAAPRRLGRKKPVPACPNPLFVQWLTEWMDEAAEKGKKSQFVYQRALGSLRRYPLPLRSG
REAAILQHFGDWLCRRLDERLERHRAEQGADAPLGAMGGASSLMGGQEGDPPSTEHRSTN
NPSASQTLLGDLEPPPMRKPRPPRRYIPAPRSGGYAVLLALYKDSTSPHSRGFLMKSELQ
RAAQPLCDKSFTLGDPGNRYTAWASVGTLIRKELVLKTHVPARYSLTPQGLALAQRLVAA
EQALISEGRAPESKTPQGAEPTHPAGEEKLQPEPQLLDGTLGPQEGTAGGSGGQRTPDPE
FVLRPGQFDIILCVDFIETMGGPAARKQDLLAELCRNAVPFDVRKLHVGDFVWVARERVQ
PRPGQLHLPPARELALDYVVERKRMADLCGSIIDGRFREQKFRLHRCGLCHPIYLLEESG
STQHLSLPESTLQQAATSTQVVDGFFVKRTRDLRESAAYLTIMTRHLNSLYGNKTLVSCT
KEESQGRCPLQPNSDSCTLMTFQEFNEGAVKNKAQTVREVFARQLMQISGVSGEKAAAIL
ERYSTPASLLAAYSACPDLESRDKLLSAIKCGKLQRNLGPALSRTLSQLYCSSGPLS
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggcggccccccggcggctggggcggaagaagccggtgcctgcctgtcctaatcccctc
ttcgtgcagtggctgacagagtggatggatgaggccgctgagaagggcaagaagagccag
ttcgtgtatcagagggccctgggctcccttcggaggtacccgctgcccctgcgcagcggg
cgtgaggccgcgattctgcagcattttggggactggctctgccggaggctggacgagcgg
ctggagagacaccgtgctgagcagggtgcagatgccccccttggagctatgggaggggcc
agctctttaatggggggacaggaaggtgatccccccagcacagagcaccgctccaccaac
aacccctctgcctcacagaccttacttggggatctggagcctccccccatgaggaagccc
cgtcccccccggaggtacatcccagccccacgctccggaggctacgctgtgctgctagcc
ctctataaggacagcacgagcccacacagccgggggttcctgatgaagtctgagctgcag
cgggcggctcagccgctgtgtgacaaatccttcaccctgggtgaccctggaaataggtac
acagcttgggcatcagtgggcaccttgatccgcaaagagctggtgctgaaaacccatgtc
ccggccaggtactctctgacaccgcaggggctggcgctagcccagaggcttgtggctgcg
gagcaggccctgatttcagagggtcgagctccagaatccaagacaccccagggcgcagag
cccacgcatcctgctggggaggagaaactgcagccggagccccagctgctcgacggcacc
ctgggaccccaggaggggacagcgggtggctctggagggcagaggactcctgaccctgaa
tttgtgctgagacctggccagtttgacatcatcctgtgtgtggattttatcgagacaatg
ggcggcccagcggcccggaagcaggatctgctggccgagctgtgccggaacgccgtgccc
ttcgatgtgcgcaagctgcatgtgggggacttcgtgtgggtcgcccgtgagagagtccag
ccccgcccagggcagctgcacctgcccccagcacgggagttggctctggactacgtggtg
gagcgaaagcgaatggctgacctgtgtgggagcatcatcgacggccgcttccgtgagcag
aagttccgtctgcatcgctgtggcctgtgccaccccatctacctgctggaggaatcagga
tcgacccagcacctgagcctaccagagagcaccctgcagcaggcagccaccagcacccag
gtagtggatggcttcttcgtcaaacgcacccgggacctgcgggaatcggctgcgtacctg
accatcatgacacgtcatctgaacagcctgtatgggaacaagaccctggtgagctgcacc
aaggaagagtctcagggccgctgccctctgcagcccaacagtgattcctgcaccctgatg
accttccaggagttcaatgagggagctgtcaagaacaaggcccagactgtgcgcgaggtg
ttcgctcggcagctcatgcagatcagtggagtgagtggggagaaagcagctgccattttg
gagagatacagcacaccagccagcctgctggccgcgtactccgcctgcccagaccttgag
agcagggacaagctgctgagtgccatcaagtgtggaaaattgcagaggaacctgggtcct
gccctgagcaggacactctcccagctgtactgcagctctggccccctctcctga
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