Chelonoidis abingdonii (Abingdon island giant tortoise): 116838855
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Entry
116838855 CDS
T07367
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04120
Ubiquitin mediated proteolysis
cabi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116838855 (SYVN1)
04120 Ubiquitin mediated proteolysis
116838855 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cabi04121
]
116838855 (SYVN1)
Enzymes [BR:
cabi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116838855 (SYVN1)
Ubiquitin system [BR:
cabi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116838855 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-ANAPC11
zf-RING-like
zf-RING_5
zf-HC5HC2H
zf-C3H2C3
zf-Nse
Motif
Other DBs
NCBI-GeneID:
116838855
NCBI-ProteinID:
XP_032660280
Ensembl:
ENSCABG00000002965
UniProt:
A0A8C0IL05
LinkDB
All DBs
Position
Unknown
AA seq
645 aa
AA seq
DB search
MDRLGGAAGRWSGAMFRTAVMMAASLALTSVVVAHAYYLKHQFYPTVVYLTKSSPSMAVL
YIQAFVLVFLLGKFMGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVAL
FTLLLFLKCFHWLAEDRVDFMERSPNISWLFHFRIISLMLLLGVLDFLFVSHAYHSILTR
GASVQLVFGFEYAILMTMVLTIFIKYILHSVDLQSENPWDNKAVYMLYTELFTGFIKVLL
YMAFMTIMIKVHTFPLFAIRPMYLAMRQFKRAVTDAIMSRRAIRNMNTLYPDATPEELQA
MDNVCIICREEMVMGAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPTQSQTPP
EQQEQAQQQQPPPHHPPLIPQPPNFPQGILPPFPPGMFPLWPPIGPFPPVPGVQPPNNAE
NPSAASSAPSTSGIQTTASTSRPGGDSASGSDTAPVGAVPGFPFPPPWMGMALPPLFGFP
PMPVPPAGFAGLTDEELRAMEGHDRQHLEARLQCLQNIHTLLDAAMLQINQYLTVLATIG
SPRPTQLPSSLNTSTSSQETPTRESTTFNSPDSTSSPGTSPAVAAVEPDSTGQTDDPSGL
VGAEGYTEPAGHEEEEEQPLPGEPDTAELRRRRLQKLESSSPPSH
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggaccgattggggggtgcagcaggtcgttggtctggggcgatgttccgaacggcagtc
atgatggctgccagcctggctctgacatcggtggtagtggctcatgcttattacctaaag
catcagttctacccaacagtggtgtatctgaccaaatccagccccagcatggcagttctc
tacattcaggctttcgttctggttttcctcctgggcaaattcatgggcaaagtgtttttt
ggccagctccgagcagcagaaatggagcacctacttgagcgatcatggtatgcggtcacg
gaaacttgcctggccttcaccgtcttcagagatgacttcagtccccgctttgtggccctc
ttcactctcctcctgttcctcaagtgcttccactggcttgctgaggaccgggtggacttt
atggagaggagtccaaacatctcctggctctttcatttccgcataatctctctgatgctc
ttgttgggtgtcctggatttcctgtttgtcagccatgcctaccacagcatcctcacccgg
ggagcctctgtccagctggtctttgggtttgagtatgccatcctcatgaccatggtgctc
acaatcttcataaaatacattctgcattcagttgacctgcagagtgagaatccatgggac
aacaaggctgtctacatgctgtatacggagctcttcacaggcttcattaaagtgctgttg
tacatggccttcatgacaatcatgatcaaagtgcacactttcccgctcttcgccatccgg
cctatgtacctggcaatgaggcagttcaagagagctgtgactgatgccatcatgtcacgc
cgtgccattcgcaacatgaacactctataccctgatgccactccagaagagcttcaggcc
atggataatgtgtgcataatctgccgggaggagatggtgatgggtgctaaacgcctgcca
tgcaatcacatattccacaccagctgcctgcgttcctggttccagcggcagcagacgtgc
cccacctgccgcatggatgtcctccgtgcctccctccccactcagtctcaaacgccacct
gagcaacaggagcaagcgcagcaacagcagccaccgccgcaccatcctccactgattcct
cagccgcctaacttcccccaaggaatcctgcccccgtttcctcctgggatgttccctctc
tggcctcccataggtccatttcctccagtgcctggtgtccagccacccaacaatgcagag
aatccctctgctgcttccagtgcaccctccacttcaggcattcagacaacagcaagtacc
tcaagaccgggtggtgattcagcatctggatctgacacagcccctgtgggagcagtgcct
ggctttcccttccctcccccatggatgggaatggcattgccacctctgtttggcttccct
cccatgcccgtgccacccgctgggtttgctgggttgacagacgaagagctccgtgccatg
gaaggccatgaccggcagcatctggaagccaggctccagtgtctgcagaacatccacacg
ctcctagatgcagccatgttacagataaaccagtatctcaccgttctggcgaccattggg
tcaccccgtcctactcagctgccaagctccctaaacacttcgacctcctctcaagagaca
cccaccagagaatccaccactttcaattcacccgacagtacctcttccccagggacctct
ccagcagtggcggcagtggaaccagactcaacaggtcaaacagatgatccatctggattg
gtgggtgcggagggatacacagaaccagctgggcacgaggaagaagaggagcagccttta
cctggggagcctgacacagctgagcttcgcaggcgccggcttcagaaactggaatcctcc
tctcccccttcccattga
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integrated database retrieval system
