Chelonoidis abingdonii (Abingdon island giant tortoise): 116838992
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Entry
116838992 CDS
T07367
Symbol
COL8A1
Name
(RefSeq) collagen alpha-1(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
Motif
Other DBs
NCBI-GeneID:
116838992
NCBI-ProteinID:
XP_032660520
Ensembl:
ENSCABG00000005011
UniProt:
A0A8C0GFY3
LinkDB
All DBs
Position
Unknown
AA seq
739 aa
AA seq
DB search
MAVLLARVQLLAVAVTVYLELVRSIQGAVYYGIKQLPPHIPQYQALGQQVPHMPLGKEGI
PMQHMGKEVPHMQYGKEYPHLPQYMKEIPQLPMLGKEMVPKKDKEIPLASLRGEQGPPGE
PGPRGPPGAPGLPGHGVPGAKGKPGPQGYPGIGKPGMPGMPGKPGAMGLPGSRGEMGPKG
EIGPMGIPGPQGPPGPPGLPGIGKPGVQGLPGQPGVKGEPGMKGPPGLPGLQGLKGEKGI
GIPGLPGLKGPPGLPGPPGPVGLPGIGKPGMIGFPGPQGPIGKPGLPGEQGPQGLLGAPG
IQGPPGLPGVGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPGFPGPKGDRGMA
GFPGALGPKGEKGHMGPPGMGGPPGEPGQPGLPGVMGPSGAVGFPGPKGEGGPVGPQGPI
GPKGEPGLQGFPGKPGFPGEVGPPGLRGLPGPMGPKGEAGHKGLPGLPGVPGQLGPKGEP
GIPGAQGQQGPSGIPGITGPSGPIGPPGLPGPKGEPGVPGPPGFPGVGKPGVSGLQGPPG
KPGALGPPGQPGLQGPPGPPGPPGPPVIIPPTPPAIGQYLPEMGPGIDGVKTPPGYMGKK
GKNGGAVYEMPAFTAELTTPFPRVGVPVKFDKLLYNGRQNYNPLTGIFTCEIPGIYYFAY
HVHCKGASVWVALYKNNEPLMYTYDEYKKGFLDQASGSTVIQLVPGDKVYIQMPSEQAAG
LYAGQYVHSSFSGYLLYPM
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgctgctagcccgtgtgcagctgctggcagtggctgtaacagtttatctagag
ctagtgagatccattcaaggggccgtctattatgggatcaagcagctgccaccccatatc
ccacaatatcaggcccttggacaacaagtacctcacatgccactgggcaaagaaggcatt
ccaatgcagcacatgggcaaggaggtgccacacatgcaatatggaaaagaataccctcat
ctgcctcagtacatgaaagaaatcccacagctgcctatgctcggcaaggagatggtgcca
aaaaaagataaagaaattccattagccagtttgagaggtgagcaaggtccccctggtgag
cctggaccaagagggccacccggggccccaggattaccaggtcatggagtgccaggagcc
aaaggaaaaccaggtccacaaggatatccaggaataggcaaaccaggtatgcctggaatg
cctggaaaaccaggagcaatggggctccctgggtcaagaggtgagatgggaccaaaggga
gagattgggcctatgggaataccagggccacagggaccaccagggcctcctggactgcct
ggaataggaaaaccaggtgttcaaggattaccaggacaaccaggagtaaagggtgaacca
ggaatgaaaggaccaccaggactcccgggccttcaagggcttaaaggagaaaaaggcatt
gggattccaggtttaccagggttaaaaggtccacctgggttacctggccctccaggtcca
gttggactcccagggataggcaaaccaggaatgattgggtttccaggaccacagggacct
ataggtaaaccgggacttccaggtgaacaagggccacaaggtcttcttggggcacctggg
attcaaggtccacctggccttccaggtgttggaaaaccaggtcaagatggaatccctggc
cagcctggattcccaggtggaaagggggaacaaggcttgccaggtttaccagggccccca
ggcctaccagggattgggaaaccaggattccctgggcctaaaggtgatcgtggcatggct
gggttccctggagcactggggcctaaaggtgagaaagggcacatgggtcctcctggcatg
ggcgggcctcctggggagccaggtcaaccaggattaccaggagtaatggggccatctggt
gctgttggtttcccaggaccaaaaggagaaggtggacctgtagggcctcaaggacctatt
ggtccaaaaggtgaacctggcctacaaggtttcccaggaaagccaggttttcctggggaa
gtaggacccccaggtcttagaggactacctggtccaatggggccaaagggagaagctggt
cacaaaggtttgccaggcctgcctggtgttcctgggcaattaggacctaaaggggaacct
ggaatccccggtgctcaaggccaacaaggtccatctggaatcccaggtatcacaggaccc
agtggcccaatcggaccacctggacttccaggacctaaaggtgaaccaggtgtacctggt
ccaccaggctttccaggagtagggaaacctggtgtttcagggctgcaaggaccaccagga
aaacctggggcacttggtccacctggccagccgggtctccagggtcctccagggcctcca
ggtccacctggtcctccagtaataatcccacccaccccaccagccattggacaatatttg
ccagagatggggcctggcattgatggagtgaagaccccacctggctatatggggaagaaa
ggcaagaatggtggtgctgtctatgaaatgcctgcattcacagcagaactcaccacaccc
ttcccacgggtcggggtgcctgtgaaattcgacaaacttctctacaatggcaggcagaac
tataacccactgactggtatcttcacctgtgagatccctgggatttactactttgcctac
catgttcactgtaaaggggccagcgtctgggtagctttgtacaagaacaatgagccactg
atgtatacatacgatgaatataaaaaaggtttcctggaccaagcttctggaagcaccgtc
attcaactggtgcctggagacaaagtttatattcagatgccatctgaacaggcagcggga
ctctatgctgggcaatatgttcactcatctttctcaggatatttattgtatcctatgtaa
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