Chelonoidis abingdonii (Abingdon island giant tortoise): 116839098
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Entry
116839098 CDS
T07367
Symbol
NUP50
Name
(RefSeq) nuclear pore complex protein Nup50 isoform X1
KO
K14295
nuclear pore complex protein Nup50
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116839098 (NUP50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cabi03019
]
116839098 (NUP50)
Messenger RNA biogenesis [BR:
cabi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116839098 (NUP50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
116839098
NCBI-ProteinID:
XP_032660668
Ensembl:
ENSCABG00000005931
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MAKRIAEKELTDRNWDQEDETEEVGTFSVASEEVLKNRAIKKAKRRNVGFESDNGGAFKG
FKGFVLPSGKGGGGFTGFGNGTEMKSLGGLSNGSSGISSTPSFTSVKTVSEVQPAFVGSV
TSNGPTTTLVEKKASGTKVNGDSQQSSSSGYTQNKMCSSSVYHKQLAALNCSVRDWIVKH
VNTNPLCDLTPIFRDYEKYLASIEQHHGSSSDSGSENESNKTTGTQSVPTFGTSKLQQGS
TFLFNSNKTEDESDKKTESTSEKNRESPLGVASNVSFNFGKNVDSSVLGSLGSGTLTSFS
FSPGNSGVFGKDAKQGKSVSTLSTRVLEAQTESGSSEDKGGDEEEEPPKTVVNEVKEDDA
FYSKKCKLFYKKDNEFKEKGVGTLHLKPAGNEKTQLLVRADTNLGNILLNVLVPPKMPCT
RTGKNNVLIVCVPNPPIDEKNSTVPITMLIRVKTSEDADELHKILLEKKEA
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagagaattgcagagaaggagttgactgacagaaattgggatcaggaggatgaa
actgaggaggtgggaactttctcagtggctagtgaagaagtcctgaagaacagagctatt
aagaaagcaaagcgcagaaatgttgggtttgagtctgacaatggaggagcttttaaaggg
tttaaaggttttgttttaccttctggaaaaggaggtggtggcttcactggatttggtaat
ggtacagaaatgaaatctttaggagggctgtccaatggaagcagtggtatttctagtact
ccctctttcactagtgtaaagactgtttctgaagtacagcctgcatttgtaggatccgtg
acatcaaatggtcccaccaccacactggttgagaaaaaggcttcaggcacaaaagttaat
ggtgacagtcaacaatcttcatcttctggttacactcaaaataaaatgtgcagctctagt
gtttatcacaaacagttagcagctctaaactgttctgtgcgtgactggatagtaaagcat
gtaaacacaaatccactctgtgatctgacacccatatttagagactatgagaaatattta
gcaagcattgaacaacatcatggaagcagtagtgatagtggctctgaaaatgaaagcaac
aaaacaactggaactcagtctgttcctacgtttgggacttcgaaacttcagcaaggatca
acgtttttgtttaacagcaacaaaactgaggatgaatcagacaagaaaactgaatctaca
tcggaaaagaacagggaatcgccattaggagttgcatcaaatgtctcatttaactttggc
aagaatgttgatagttctgttttgggttcacttggttctggcacactaactagtttttca
ttctcccctgggaattcgggtgtatttggaaaagatgcaaagcagggaaagtctgtctcc
acgctttccaccagggtattggaagctcagacagaaagtggaagtagtgaggataaagga
ggagatgaagaggaagagccaccaaaaacagttgttaatgaggtaaaagaagatgatgcc
ttctactcgaagaagtgcaaactgttctacaaaaaagataatgaatttaaagaaaagggt
gtaggaacgctgcatttaaaacctgcaggaaatgaaaaaactcaactgctggtacgagca
gacaccaatttaggtaacatactattgaatgtgttggttccgcccaagatgccatgcaca
agaacgggaaaaaacaacgttcttatagtctgtgttcccaatccaccaattgatgagaag
aattccactgtccctatcactatgttaataagagtgaaaacaagtgaggatgcagatgag
ttgcacaaaattttactggagaaaaaggaggcctaa
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