Chelonoidis abingdonii (Abingdon island giant tortoise): 116839594
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Entry
116839594 CDS
T07367
Symbol
TRIM25
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25 isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
116839594 (TRIM25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cabi04121
]
116839594 (TRIM25)
Enzymes [BR:
cabi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116839594 (TRIM25)
Ubiquitin system [BR:
cabi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116839594 (TRIM25)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
zf-RING_2
zf-C3HC4_2
ANCHR-like_BBOX
zf-RING_5
zf-B_box
Motif
Other DBs
NCBI-GeneID:
116839594
NCBI-ProteinID:
XP_032661598
Ensembl:
ENSCABG00000005236
LinkDB
All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
MAELVRAPSVPSLAGLEEELTCSICLCLFDSPVTTPCGHNFCGPCLDITWSGLLQGFSCP
QCRASFQRRPELQKNTVLCRVVEQFQSTQPAGPAEEKRGRDGSRSEVACDSCLEAAAAKT
CLTCMASFCSEHLRPHQESPAFRDHQLCPPLRDLQQRKCQEHNKLLEFYCRDHASCICCV
CLVSHKTCATGPVQEAKAEKESQLKNRLTELYNQSEKASLALDEVRVLQREANETANRKM
DLLRSEFLEIKALIDQEEYQAMKKVAEEEKRVSDKFDYVHNVLGKKKNEIQVIRDQIEMA
LTEDDDIAFLKNAAKLRHTSTKDVFIPRIDLDQNLIHTIYQGAFSLKEIVKQTVTQPQEK
KMEAGGQSRPSVEEKATPQWKPKAFQINSSNKLSAFGRKTVGSHAPKIGKAPQKPQPELS
EDADTRDKRKPAKSAPNTVNPCATSLESFLTKSREELLEYAAKITLDFNTAHNKVLLSDR
NTKMSVSEIPQKYSPHPQRFTYCSQVLGFQCFKRGIHYWEVELQRNNFCGIGICYGSMDR
QGADSRLGRNSSSWCIEWFNSKISAWHNDLEKCLPNTKATKIGVLLNYEGGFVIFLGVGE
KHNLIYKFKAQFTEALYPAFWVFSSGTMLSLCQLK
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctagtgcgggcgccgtccgtgccctccctggccgggctggaagaggagctc
acctgctccatctgcctgtgcctcttcgacagcccggtcaccacgccctgcggccacaac
ttctgcgggccctgcctggacatcacctggagcggcctcctgcagggcttcagctgcccg
cagtgccgggccagcttccagcgccggcccgagctgcagaagaacacggtgctgtgccgg
gtggtggagcagttccagagcacccagcccgcgggcccggccgaggagaagagaggccgg
gacgggagccgctccgaggtggcctgcgacagctgcctggaggccgcggcggccaagacc
tgcctcacctgcatggcctccttctgctcggagcacctgcggccccaccaggagagcccg
gcgttccgcgaccaccagctgtgcccgccgctgcgggacctgcagcagaggaagtgccag
gagcacaacaagctgctggagttctactgccgggaccacgccagctgcatctgctgcgtc
tgcctggtcagccacaagacctgcgccaccggcccggtgcaggaggccaaggcggagaag
gagtcacagctgaagaacagactgacggagctgtataatcagagcgaaaaagcttctctg
gcactggatgaagtgagggtgctgcaaagagaagccaatgagacagctaaccgaaagatg
gatttgctcaggagtgagttcttggaaattaaagctttaatagaccaagaagaataccag
gcaatgaagaaggttgcagaagaggaaaagcgagtctctgataagtttgattatgtccat
aacgtcctgggaaagaagaaaaatgaaattcaggtcatcagggaccagattgaaatggca
ctgactgaagatgatgatattgcatttttaaagaacgcagcgaaattgcgacacacttca
accaaagatgttttcatccccagaattgatctggaccaaaacttgatacacaccatttat
caaggtgccttttcccttaaagaaatagtgaaacaaacagtgactcaaccacaggagaag
aaaatggaagcaggtggacagtccagaccaagtgtggaggagaaggcaactccacagtgg
aaacctaaggcttttcaaataaactcttcaaataaactctcagcatttggaagaaaaact
gttggatcacacgctccaaaaataggtaaagcccctcagaagcctcagccggagttgagt
gaggatgcagacaccagggataaaagaaaacctgccaaatctgcaccaaatactgtgaat
ccatgtgcaacatctctggaaagctttttaacgaaatcgagagaggagctcctggagtat
gctgctaaaatcacgctggatttcaacaccgctcataacaaagtgctgttatcagacaga
aacaccaagatgtcggtctctgaaataccccagaagtatagcccccaccctcagcgcttc
acctactgttcccaagtgctgggcttccagtgcttcaagaggggcatccactactgggaa
gtggaactgcaacggaacaacttctgtggcattggcatctgctacgggagcatggacagg
caaggggcagacagccgcctggggaggaacagcagttcctggtgcattgagtggtttaac
tcgaagatttcagcctggcataatgatcttgaaaaatgtctgcccaacaccaaggccacc
aagattggtgtgctgctcaattatgagggaggattcgttattttcctgggtgttggcgag
aaacataacttgatctacaaatttaaagcgcagttcactgaagcgctgtatcctgctttc
tgggtgttttccagtggcactatgctttcactctgccagttgaaataa
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integrated database retrieval system
