Chelonoidis abingdonii (Abingdon island giant tortoise): 116839680
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Entry
116839680 CDS
T07367
Symbol
NISCH
Name
(RefSeq) nischarin isoform X1
KO
K24095
nischarin
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cabi04990
]
116839680 (NISCH)
Domain-containing proteins not elsewhere classified [BR:
cabi04990
]
Phox homology (PX) domain-containing proteins
Other PX domain-containing proteins
116839680 (NISCH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PX
LRR_4
LRR_8
LRR_9
LRR_NXF1-5
PH_PLEKHM2
Motif
Other DBs
NCBI-GeneID:
116839680
NCBI-ProteinID:
XP_032661673
Ensembl:
ENSCABG00000014206
LinkDB
All DBs
Position
Unknown
AA seq
1426 aa
AA seq
DB search
MEAAAVGAGEEGEEPPKEARILGSELVESYTVYIIQVSVGSHQWTVKHRYSDFHDLHEKL
VSEKKIDKNLLPPKKIIGKNSKSLVEKREKELEVYLQTVLVKFPIAAPKLLSHFLHFHLY
EINGITAALAEELFHRGEQLLMAGEVFSLRPLQLYAVTQQLRQGKPTCANGDAKTDLGHI
LDFTCRLKYLKVTGTEGPFGTSNIQEHLLPFDLSIFKSLHQIEINHCGANLIKGLTSSKH
TLTTMSVRFSASSMKEILVPEASEFDQWVPEGALSSFPVTAVIPTWKTLTTLDMSHNRIS
QIDDSVKLIPKIEFLELSHNDVSLVENLQHLYNLIHLDLSYNKLMSLKGVHTKLGNIKTL
NLAGNLLERLCGLNKLYSLVNLDLSSNKIDQIDEIRNIGSLPCLEKVVLSNNPLSIIPDY
RTKVLAQFGDRASEVCLDNISTTEKELDTVEVLKAIQKAKEVKYKLNSSDKKISEDSRLT
AASAKSNCSSLTVHPSSSSLPRPVSSSQEIICRKTALASILSPSSSSTPTDHTVTQRCSE
ILDSRYRNQVPTSLLDLSKEYGRGLHICLDHSDEEHGALPDPRNTIILPFTCMSYTATNQ
DFIQHLSTLIAQALQRSPPSSTEIENKESPVSDSSLTDNEDGYFEMGLGDRTFEFCATSD
IAPPAPDSTRAESVDIVKVLWSFSIQVHKGRVRQFASCLVLTDSVVAVFEIPHQDPKGNC
QHIPAALKLALCFPYTDLTEFGFLMPEMCLTLKMRNNDNCLCIVSDSQNLQDFYSCLQTC
CSQSCTSLLSSSTLYCGKASLQEFVYQLMGFYQISPDGMEIKGCFPTYLVYSNKTDVQKA
LHLPESVDDNRAWSDHALCSALYSTLYKSAEQSHYAFHPCWIFLTPQHLHIVKVDFNVVP
SKCIDSEDARNVFKLSRIPLASVVLHPTNHPIQQKGSFSDGHVLELLIGHKFVTAVFVLP
HEKFHFLRIYSLLRTLLQDVKTIVILKASNSLASARNHLLDSKNRHSQTAGFCKPCLTLS
SLYPSEFLMQKITEDNQIPAYLPISLSLQYVAGLKGNAIVEFFHNSVAEVENEELRHLMW
SSVLFYKTPDTEVTACVMLSTKAIYFLLDDSVTHTNEHQLDSWNQENSDCENSSFHLSCC
FVLKLNDLQSVNVGLFDQYFRITGHSADHIVTCLTRDSYSTHAFIQHLMAVLSLLARTPS
PEPIDKDFYSEFGNKNTGKMENYELIHSSRVKFIYPNEEEIGDLAFLVAEKMYSLANFQS
LNILLYVLAFQVNHTEETAQANSSLQPKTLILTSSDLFLFNEDYISYPLPEFAKEPPKRD
KYQLTDGRRIRDLDRVLMGYQTYPQALTFVFDDVQNQDLMQNLMLDHFGDTFSAPKLNAK
LKGSGNREIQWYIFIPSAESREKLISLLARQWEILCGRELPLELTG
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcggcggtgggggccggggaggagggtgaggagccgcccaaggaggcccgg
atactcggctccgagctggtggagagttacacggtatacattattcaagtcagcgttggg
agtcatcagtggacagtcaaacatcgttacagtgacttccatgacttgcatgaaaagctt
gtttcagaaaaaaagatagataaaaacctgctgcctccaaagaagattattgggaaaaat
tccaaaagtctggtggagaaaagagagaaggaattagaagtttacttgcaaacagttctg
gtcaagttccccattgctgcacccaaattgttgtcacacttcttacactttcatctatat
gaaatcaatgggatcacagctgcgttggctgaagagctctttcacagaggagaacaatta
ttaatggctggagaggtcttcagcctcagaccattgcagttatatgctgttactcaacaa
ttgcgccaggggaaacctacatgcgctaatggagatgccaaaactgatctaggtcatatt
ttggatttcacatgtagactcaaatatttaaaggtaactggcacagagggaccttttgga
accagcaacattcaggagcacctcttgccttttgatttgtcaatatttaaatctcttcat
cagatagagataaatcactgtggtgcaaatcttattaaagggctgacatcatcaaagcac
actttaaccacgatgagtgttcggttttcagcatcctcaatgaaagaaattctagtgcct
gaggcctctgaatttgaccagtgggttccagagggtgccctttcaagttttcctgtgaca
gcggttatcccaacttggaagactttaacaactttagatatgagtcacaatcgcatatct
cagattgatgattcagtgaaactaattccgaagattgaattcctagaattgagtcacaat
gatgtgtcgctagtagagaatttacagcatctttacaacctcattcatctggacttatcc
tacaacaaacttatgtcgctgaaaggtgttcatacaaaacttgggaacatcaaaacactg
aatttagcgggaaaccttctggaaaggctatgtggccttaacaaactgtactcgctagtc
aatctggatcttagcagcaacaaaatagatcagattgacgaaataagaaatataggaagc
cttccatgtttagaaaaggtggtcttatccaacaatcctttgagcatcattcctgattat
aggaccaaagtgctagctcaatttggggacagagcctcagaggtctgtttggataatatc
agtaccacagaaaaggaacttgacactgtagaagtgttgaaagctattcaaaaagcaaag
gaggttaagtacaaactgaatagctctgataagaagatcagtgaggactccaggctcact
gctgccagcgccaaatcaaactgttcttctcttactgttcatccttcctcttcttctctg
cctcgtcctgtcagctccagccaagaaataatttgtagaaaaacagccctagctagcatt
ttatcgccatccagtagttcgactcctacagaccatacagttacccagagatgctctgaa
atactagactctagatacagaaatcaggtgcctacttctctgttggacttatcaaaagaa
tatggaagaggtcttcacatttgtttggaccattcagatgaagaacatggtgcattgcct
gaccctcgtaacaccatcatcttgccttttacctgtatgtcatacactgccaccaaccag
gattttatccagcatctctccaccttgatagcacaggctttgcagagatcacccccttcc
tctactgaaatagaaaacaaagagagccctgtgagtgattccagtctcacggataatgaa
gatggctattttgaaatgggacttggagaccggactttcgagttctgtgctacttcagat
attgccccaccagctccagatagcacaagagcagagagcgtagatatagtcaaagttctc
tggagtttttctattcaggttcataaaggaagagtcaggcagtttgcctcttgtttggtt
ttgactgatagtgtagtagctgtgtttgagattcctcatcaagatccaaaaggcaactgc
caacatatcccagctgccttgaaactagcactgtgctttccatatacagatcttacagag
tttggctttctcatgccagaaatgtgtttaaccctcaagatgagaaataatgacaactgc
ctatgtatcgtttcggactcccaaaatcttcaggacttctattcctgtttacaaacatgc
tgctctcaaagttgcacatccctgttatcaagttccacattgtactgtggcaaagcaagc
ttgcaagaatttgtctaccaactgatgggattttatcaaatttcaccagatggcatggag
ataaaaggttgcttcccaacttaccttgtttacagtaataaaactgatgttcagaaagcc
ttgcatctaccagaatcagtggatgataacagagcatggtctgaccatgccttgtgttct
gcactttattccacattgtataaatctgctgaacagagtcactatgcattccatccttgt
tggatatttctgacaccccagcatttgcacatagtaaaggttgattttaatgtagtgcca
tctaaatgtatagactcagaagatgcaagaaatgtattcaagctgagcaggattccactg
gcttctgttgtgttgcatccgaccaatcatcccatccagcagaaagggtcattttcagat
ggacatgtgctagagttactcattggacacaaatttgttacagcagtatttgttctacct
catgaaaaattccattttctaagaatctacagtcttttgaggacacttctgcaggatgtt
aaaactatagttattttgaaagcttccaacagtttggcatcagcaagaaatcacctcttg
gattcaaaaaacagacacagccagacagcaggcttttgcaagccttgtttgacgctatca
tctttatatccatctgaatttctgatgcagaaaattacggaagataaccaaattccagct
tatcttccaatatctttatctcttcagtatgtggctgggctaaaaggaaatgcgattgtg
gagtttttccataacagcgttgctgaggtagaaaacgaagagctgagacatcttatgtgg
tcttctgttttattttataaaactcctgacacagaagtgacggcttgtgtcatgctctca
acaaaagctatttactttctgttggatgattctgtaactcatactaatgagcatcagttg
gactcttggaaccaagaaaactcagattgtgaaaatagctctttccacctctcttgctgc
tttgtgctaaaacttaacgatctgcaatcagtgaatgttggactttttgatcaatatttt
cgaattactggacattctgcagatcatatagtaacctgcctaaccagagacagttacagt
actcatgcctttatacagcacctcatggcagtgctgtcattgctggcacgcacaccttca
ccagaaccaatagataaggatttctactctgaatttgggaataaaaatacaggaaaaatg
gagaattatgaactgattcactctagtagagtaaagtttatatatcccaatgaagaggaa
attggggaccttgcttttctagtggcagagaagatgtacagtctggctaacttccagtct
ctaaatatccttctatatgtgttggcatttcaagtgaatcatacagaagaaactgctcaa
gccaatagttcacttcagcctaaaacactcattttaaccagttcggatttgttccttttc
aatgaggattatatcagttacccactacctgaatttgcaaaggaaccaccaaagagagac
aaatatcagctcacagatggaagacgaatccgtgatttagacagagtgcttatgggctat
cagacatatccacaggccctcacgtttgtgtttgatgacgttcagaaccaagatctcatg
cagaacttaatgctggatcacttcggagatactttcagtgccccaaagttaaatgctaaa
cttaaaggcagtgggaatagagagatccagtggtatatctttatcccaagtgcagaaagc
cgtgagaaactaatatcactgcttgcaagacagtgggagatcttatgtggtcgggagctg
cctttggaactcactggataa
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