Chelonoidis abingdonii (Abingdon island giant tortoise): 116839706
Help
Entry
116839706 CDS
T07367
Symbol
STAB1
Name
(RefSeq) LOW QUALITY PROTEIN: stabilin-1
KO
K19020
stabilin-1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116839706 (STAB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cabi00536
]
116839706 (STAB1)
Glycosaminoglycan binding proteins [BR:
cabi00536
]
Hyaluronan
Cell surface receptors
116839706 (STAB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fasciclin
EGF_3
Xlink
EGF_STAB1-2
cEGF
FXa_inhibition
EGF
EGF_Teneurin
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
116839706
NCBI-ProteinID:
XP_032661725
LinkDB
All DBs
Position
Unknown
AA seq
2663 aa
AA seq
DB search
MFNLCFFLDLFLSRRSYLTEIASSTSTPLQEKGPICKSMKMHPPGLLFSFLSAWFISTVE
GQSQKLKSMHCNVKTMFTLATPCTSCAVAPKVVCPKGWIKMTQALGERGCRYTVNLGEDT
LSLLGCSHMCKKEIEEKKCCPGFWGTECYECPGGPEKPCSGHGTCLDGITRNGTCTCEGR
YGGFACQDCLDENLFGPDCQSVCECQHGVCNHGISGDGSCTCHGGYTGPKCDQELPLCRG
VACGNKAQCVVMNGMAICDCMPGYRKSGSICQAQDPCTSSPCSSLAVCKALSPEKYECTC
KDGYHGDGKICQPINPCIINNGGCPENTTVCIYKSPGKSSCVCKPGMSGLNPSVGCSSVN
ECQRYFCDASSKCKISPDGTASCVCKDGEIGDGRSCYKNLMNEISQINTRGRWYKNLNSA
NKMFASGCSLALTKYGPFTVFVPSRQSYSDRIDFNDTIAQHLCKMHIIPGQHLLEDMVKI
KTLWTLSGHQLTFNDQIQSYTKSFRYQDLPGELYTVIQSNIPASNGIIHIVNTLRKTTSF
HNLGNPQKTIGEILATVEIFSRFETILENCGLPSILDGPGPFTVFVPSNNGVDKLRDGRL
IYLFTEGINKLQELVKHHIYTGAAVTVEKLTTMPQIITMANQILTINITENGRILLDDSG
IPLNKRDIVASNGIIHTLDGIFIPPSIIPILPQRCNEEQHKIIAGSCVDCGALNTSICPP
HSTKMAQEIYPSECVYVHDPLGLNVLKKGCARYCNQTILKPGCCKGFFGPDCTPCPGGFS
NPCYGRGNCSDGMQGNGNCLCFEGFKGIACHICSNPNKHGENCDEDCGCIHGICDNRPGS
KGKCQSRSCKDGYTGEFCDRTSQNCGPTASQYCHRNAVCSLNNTARCICADGYEGDGFSC
LPIDLCRKPERGGCSENAICTSTGPGTATCQCNKGWTGDGKACVAIDNCVLETRGDCHMN
ADCSFIGPGQSKCMCKSGYAGDGYNCEPINPCKLDNGGCHDLAVCEPLGGGDRSCACAPG
YMGDGLTCYGDVLKELARNSHFAGFYEWIKKSLFSIPAGVNVTVLVPTEAAIKNLSQAEK
DFWLKPYTLPFLVRSHFLQGSFTSEQLKEHKGEELPTLNPRTRWEITNSSGAIMIQNAVI
VVADIPAINGTIYILNKVLLPPLGDIPPSRPSLQQQLDMVPAFTLFKELLLQYQLIGNIE
SSEKYTIFVPGNNSIGEYCHSSNITQLDNDTVQYHVVLGEKLSSTDLKNGVHKSTMLGVS
YWLMFYKNNNQTFVNNVHLDGKFFETKNGMLIGVSGVLQIQKNHCTANTTVILKSRCAKC
DRGIKCPSGSVLAETPGEGKMPHCLYKLEVSKVVGCYFTCVKVSLVSICCPGYYGHMCEM
CPGKPGSSCSGNGVCQDGITGSGECRCHEGFHGTACEMCEVGRYGAGCKSVCTCRNGICN
DGLHGDGSCKCFQGWEGITCERRIGIDLCNNTCHLMANCINGSVDSLPICSCSAGYAGNG
TYCSEINPCVTNNGGCSIYATCINVSAGENTCTCKEGYAGDGTLCQEIDGCLERNGNCHS
YAECTKTGPNLVACNCLPGYSGDGVQQCVPINLCSENNGGCSRFGFCKYTGPGTRNCSCG
WGQVGDGFTCRGSVYQELLRSKAASEFFKQLLAFKIKELSGEGPFTVFVPDADSIQNSTT
FSEWTNKSLIKDLLRYHIVSCRKLLASELETHKSITALSGHRIRIVVKENSVHLNEEATI
ITSDIVGKNGVIHIIDKILIPADLQSENISSHLAQQSITEVAEAYGYKIYSKLLRVNGLN
SLGILSSSGLCGSFTQTLHVFVVSMLSCVSGQEAELLSLVNNSAHRPFTMLWPTDAVFNA
LPKKMQSWLYNKDHRDKLAAYLKMHMIRDTKVVAGNLPHIASVRTMHGSTISFSCSKSNV
GELLVDNGNAKIVQRHMEFDGGIAYGIDQLLEPPNLGSRCDDFLSVELRGSVESCGVCGF
EPSCPAGSVERGKSQSCFYYVNPFSRLSPFSHRNYPLSRPHWYSSLFDNGGRWHSLRRSL
TKGCKRVCFSTSWVPQCCANHYGRDCHVCPGGLEAPCSNRGTCDDRISGSGRCNCTEAFI
GTACELCAPGRYGPDCQECKCTENGMCNEGLNGDGICFCTEEWTGERCETKLAATPVCSP
ACHPNASCRADNICECNLHFEGDGRTCTVIDQCRDDNGGCSEHANCTQVGVQQSCTCLPD
YQGDGYVCSPIDRCADGRNGDCSEHALCISTGPNARKCECKAGYVGNGIQCLEEAVPPTN
RCLEKNGYCHPEAICTDLHFQDTTIGVFHLQSPRGKYTFTYVEAEAACMAEDAALATLQQ
LSAAQQMGFHLCLVGWLNNGTAGYPTVYPTASCGSNHVGIVDYGSRKNLTERWDAFCYRA
KDVRCNCRDGFIGDGYSCSGNLLAVLAEHSNFSTFYSMLLDYTNTTQDGPEFLNFLSNDT
AYKTLFVPLNSGFGVNMTLTWEEVKLHVSLSDVSLLSFNLTNGTVIPSCSGYNLLIADAP
LLNSTQPPGSKLVNNTLIVQWDILTFNGIIHAIKEPLRMPVHLAQVTNAMESSHPVTIGV
TSAVGVVLLLLAVAGVSYCYQKIKNPGFQFHYFQADLEEEEQARNPPLVSFPNPIFGDQS
LMCDPFEDSFRGEDFSDTHRILE
NT seq
7992 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacctctgttttttcttggatctgtttcttagtaggcggtcttatcttactgaa
attgcatcctctacatcaaccccccttcaagaaaagggtcccatctgtaaaagcatgaaa
atgcatcctcctgggttactgttttctttcttatcagcatggttcatttccacagttgaa
gggcagagtcagaagttaaaatccatgcattgcaatgtcaagacgatgttcaccttggct
acaccttgcacctcctgtgctgtggcccccaaagtggtgtgtccaaaagggtggataaag
atgacccaagcgttaggagaaagaggctgcagatacacagtaaatcttggagaagacacc
ctttccctactagggtgcagtcacatgtgtaagaaggaaattgaggagaaaaaatgctgc
ccgggattctggggtactgagtgctatgaatgccctggtggacctgaaaagccctgcagt
ggccatgggacctgtttggatggtataactcggaatggaacctgcacctgtgaggggagg
tatggcggctttgcctgccaagattgtctggatgagaatctgtttggccctgactgtcaa
tcagtgtgtgaatgtcagcatggagtgtgcaaccatgggatctctggtgatggaagctgt
acctgccatggaggttacactggcccgaagtgtgatcaagaacttccgctttgcagaggt
gtagcctgcgggaacaaggcccagtgtgtggtgatgaacggaatggcaatatgtgactgc
atgccaggctatagaaagagtgggagcatatgccaagctcaggatccttgtacttcatca
ccatgctcctcgttagctgtctgtaaggctctgagtccagaaaaatatgaatgcacgtgc
aaagatggttatcatggagatgggaagatatgccaacccatcaatccatgcattatcaat
aatggaggctgccctgaaaataccactgtctgtatctataaaagtccaggaaagtcatct
tgtgtgtgtaagcctggaatgagtggcctgaacccttcagtaggctgctcatctgtcaat
gagtgtcagcggtacttctgtgacgcgagttcaaaatgtaaaatcagtccagatgggact
gctagctgtgtctgcaaagatggcgagattggagatgggagaagttgctacaaaaatctc
atgaatgagatctctcagattaatactcgaggaagatggtacaagaacttaaacagtgca
aacaaaatgtttgcttcagggtgttctttggcactgacaaaatatgggcctttcactgtc
tttgtgccaagccgtcaatcgtatagtgatagaattgacttcaacgacacaattgcccag
catttatgcaaaatgcatataattcctggtcagcatttgttggaagatatggtcaagatc
aagacactgtggacattgtctgggcatcagctgacgtttaatgatcagatacagtcctac
actaagagctttaggtatcaagacctgccaggggaattgtatactgtcattcagtcgaac
ataccagcatccaatggaattatacatattgttaacactctaaggaaaacaaccagcttt
cacaaccttggaaatccacagaaaaccattggggagatccttgctacagtggagatcttc
agtcgatttgaaactatcctggagaactgtggcctgccttcgatactggatggaccagga
cccttcactgtgtttgtgccaagcaacaatggagtggataagttaagagatgggagactt
atttatctttttacagaggggataaataagcttcaggagcttgtgaaacatcacatctac
actggagcagcggtgactgtagagaagctgacaacgatgccacagattataaccatggca
aaccagatacttaccatcaatatcactgagaatgggagaattctgttggatgattctggg
attcccttaaacaagagggacattgtggcatcaaatggtatcattcataccttggatggc
atcttcattcctccttcaataatccccattctgcctcagaggtgcaatgaagaacagcac
aaaatcatagcaggctcttgtgttgattgtggggccctgaacaccagcatttgcccacct
cacagcacaaaaatggctcaggagatctatccaagtgaatgtgtctatgtccatgatcca
ttaggcttgaatgttctgaagaagggctgtgcccggtactgcaatcaaaccattctgaaa
cctgggtgttgcaaaggattctttggtcctgactgcacgccatgccctggtggattctcc
aatccatgctatggcagagggaattgtagtgatggaatgcaagggaacggcaactgtctc
tgctttgagggtttcaaaggaatagcctgccacatctgctcaaacccaaacaagcatggg
gagaactgtgatgaagattgcggttgcatccatggaatttgtgataacaggccgggcagc
aagggaaagtgccagtcccgttcatgtaaggatggctatacaggggaattctgtgacagg
acttctcagaactgtggcccgactgcatctcagtattgtcaccggaacgcagtctgcagt
ctcaacaacacagcaaggtgcatctgtgctgatggctatgaaggggatggattttcctgc
ctgcccattgatctttgtaggaagccagaacgaggaggctgttcagaaaatgccatatgt
accagtacaggccctggtactgctacctgtcagtgtaacaagggctggactggggatgga
aaagcctgtgttgctatagataactgtgttctggagacaagaggggactgccacatgaat
gcagactgcagctttattggacctggacaaagcaagtgtatgtgcaagagtggctatgct
ggtgatggctataactgtgaacccattaatccttgcaagctggacaatggtggttgccat
gatttggctgtgtgcgagcctcttggaggaggagaccggtcctgtgcttgtgctccgggt
tacatgggagatggacttacatgttatggagacgtattaaaggagctggccaggaattcc
cactttgcaggcttctatgagtggattaagaagtctctcttcagcatcccagcaggagtc
aatgtcactgttttggtgcccacagaagccgccatcaaaaacctgagccaggctgaaaaa
gatttctggctgaagccctacacgctgccatttttagtcaggtcccattttctccaaggg
tccttcactagtgagcagcttaaagagcacaagggtgaggagttacccactctcaatcca
cggaccagatgggagataaccaacagtagcggcgctataatgattcagaatgcagtcatt
gtagtagctgacattcctgctattaacggcactatttatatcctaaataaggttttgtta
ccacctttaggagatatcccaccaagtcgccccagtctgcagcaacagctcgatatggtc
cctgcatttactctgttcaaggagttgttactgcaataccagttgattggaaatattgag
tcctctgaaaaatataccatttttgtcccaggaaacaattcaattggggaatattgccac
tcttccaacattacccaactggataatgacactgtgcagtaccatgttgtacttggagag
aagctctcctctacagacttgaaaaatggagtccataaaagcacaatgttaggagtctcc
tactggctaatgttttataaaaacaacaaccagacatttgtaaacaatgtccacttagac
ggtaaatttttcgaaacaaagaatgggatgttgattggggtttctggggttctacagatt
cagaaaaatcattgcactgccaataccacagtgattctgaagtcaagatgtgctaaatgt
gacagggggatcaagtgtccttccggatcggtcctggcggaaactccaggagaagggaag
atgccacactgtttatataaacttgaagtttcaaaagtagttggttgttatttcacctgt
gttaaagtttctttagtctctatctgctgtccaggttactatggacatatgtgtgagatg
tgcccagggaagccaggcagctcgtgttctgggaacggagtgtgccaggatggcattact
ggcagcggggagtgtcgctgtcatgaaggcttccatggcacagcctgtgagatgtgtgaa
gtgggcagatatggagcgggctgtaaatcagtgtgtacttgcagaaatggaatctgtaat
gatggcttgcacggagatgggagctgcaaatgtttccaaggttgggagggcatcacctgt
gaaagaagaattgggattgatttgtgtaacaacacttgccacctgatggccaattgcatt
aatggctctgtggattccctgcctatttgctcctgctctgctggatacgctgggaatgga
acatattgctcagaaataaatccatgtgtgactaataatggtggttgctccatatatgca
acatgtattaatgtttctgctggagagaatacctgcacttgtaaggaaggctatgctgga
gatgggactctgtgccaggaaatcgatggctgtctagagcgcaatgggaattgccacagc
tatgcagagtgcactaaaacaggcccaaatctggttgcttgtaactgtcttcctggctac
agtggagatggtgtgcagcaatgtgtccccatcaatctttgcagtgagaataatggaggc
tgtagtcgatttggcttctgcaagtacactggacctgggactcgaaactgctcctgtggt
tggggccaagttggagatgggttcacttgcagaggcagcgtatatcaggagctcctgaga
agcaaagcagcatccgagttctttaagcagttactggccttcaaaatcaaggagttaagt
ggagaggggcctttcaccgtctttgttccagatgcggattcaatacaaaacagtacaacg
ttcagtgaatggacgaacaaaagcctcatcaaagatttacttcgttatcacatagtgagt
tgtcggaaactgctggccagcgaactggagacacacaagtccatcacggctttgtcagga
cacagaataaggattgtggtgaaagagaatagtgtgcatctaaatgaggaggcaacgatc
atcaccagtgacattgttggcaagaatggggtgatccatatcattgacaagattttaatc
ccagcagatttgcagagtgagaacatttcttcccatttagcgcagcaaagcatcactgag
gtggcagaagcatatggctacaaaatctacagcaaactactgagggtaaatggtttgaat
tctctaggaatactgtctagttctgggctatgtggatccttcacgcagacactgcatgta
tttgttgtttccatgttgtcttgtgtctctggacaggaagcagaactgctatctctggtt
aacaactctgctcacagacccttcaccatgctgtggcctactgatgctgtatttaatgcc
ctgccgaagaagatgcaatcgtggttgtacaataaagaccacagggacaagctggcagcc
tatctcaaaatgcacatgattagggatacgaaggttgtagctggtaacctgccacacatt
gcttctgtaaggaccatgcatggatccaccatctcattcagctgcagcaagagcaatgtc
ggggagctcctggtggacaatggcaatgctaagatcgtccagaggcacatggagtttgat
gggggcattgcctatggcattgatcagctgttggagcccccaaacctgggatcccgctgt
gatgatttcctctctgttgagcttaggggttcagttgagagctgtggtgtttgtggtttt
gagccttcctgtcccgctggatcagttgaacggggcaaaagccagtcttgcttttattac
gtaaatccattttccaggctctctcctttttcacaccgcaactatccgttatcaagacct
cattggtactcatcactgtttgataacggtggtcgctggcattctcttcggaggtccctg
acaaaagggtgcaaaagagtctgtttctccaccagctgggtaccgcagtgctgtgcaaac
cattatggaagagactgtcatgtctgcccaggagggctggaggctccctgcagtaaccgt
ggtacttgtgatgataggatcagtggatcaggacgatgcaactgcaccgaggctttcatt
gggacagcttgtgaactgtgcgcgccaggcagatacgggccggactgccaagagtgtaag
tgcacagagaatgggatgtgtaatgaaggactgaacggggatggaatctgtttctgcact
gaggaatggacaggagagcgctgcgaaaccaaactagctgcaacaccggtgtgttcccca
gcttgccaccccaatgcctcctgccgagctgataatatctgtgaatgcaacttacatttt
gaaggagatggcagaacttgcacagtgattgatcagtgccgggatgacaatggagggtgc
agtgagcatgccaactgcactcaggtgggagttcagcaatcctgtacctgcctaccggat
taccaaggagatggctacgtctgcagccccatagacaggtgtgcggatggcaggaatgga
gactgcagcgagcacgccttgtgcatcagcactgggccaaatgctcggaagtgtgagtgc
aaagcaggttatgttggcaatggaatccagtgcctggaggaagctgtgccacccaccaac
cgctgcctggaaaagaacgggtactgccaccccgaggccatttgcactgatctgcacttt
caggacacaaccattggcgtgttccacctccagtcaccaagagggaagtacaccttcacc
tacgtggaggctgaggctgcctgcatggccgaagatgctgctttggccactctccagcag
ctctcggcagctcagcagatgggtttccatctgtgcttagttggttggctcaataatggc
accgcaggatacccgaccgtgtacccgactgccagctgtggctccaaccacgttggcatt
gtggattatggctcccggaaaaacctgactgagaggtgggatgctttctgctacagagct
aaagatgtgaggtgtaattgtagagatgggttcatcggagatggctactcctgcagtgga
aatctcctggctgtgctggctgagcactccaacttttcaaccttctattctatgttactg
gattacaccaacaccacgcaagatggacctgagttcctcaacttcctctccaatgacacc
gcatataaaactctctttgtacccttgaattctggctttggggtcaatatgacattaaca
tgggaggaagtgaagctccatgtctccctgagtgatgtctccctcttgagcttcaatctc
accaacggtaccgttataccttcctgctctggctacaaccttctcattgcagatgcgccc
ctgctgaatagcactcaaccccctggttccaaactggttaataataccttgatcgtacag
tgggacattctgaccttcaatggaatcattcatgccatcaaagagccacttaggatgcct
gtgcatctggctcaggttactaatgctatggaatcatctcatcctgtgaccattggggta
acatcagctgttggtgtagtgctgctgctattagctgttgctggagtgtcctattgctac
caaaaaataaaaaacccaggattccagttccactactttcaggctgacctggaagaggaa
gagcaggccaggaacccgcccttagtgtcattcccaaatcctatctttggggaccagagt
ttgatgtgtgacccatttgaggactctttcaggggggaagatttttcagacacccacaga
attcttgagtaa
DBGET
integrated database retrieval system
