Chelonoidis abingdonii (Abingdon island giant tortoise): 116839731
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Entry
116839731 CDS
T07367
Symbol
NPHP3
Name
(RefSeq) nephrocystin-3
KO
K19360
nephrocystin-3
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cabi03037
]
116839731 (NPHP3)
Cilium and associated proteins [BR:
cabi03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
116839731 (NPHP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
NPHP3
TPR_10
TPR_1
TPR_7
TPR_8
TPR_2
TPR_MalT
TPR_16
TPR_17
TPR_19
NPHP3_N
TPR_14
TPR_11
NACHT
AAA_16
KAP_NTPase
AAA_22
AAA_14
DUF2225
AAA_19
14-3-3
Viral_helicase1
T2SSE
AAA
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
116839731
NCBI-ProteinID:
XP_032661758
Ensembl:
ENSCABG00000015320
UniProt:
A0A8C0HJ66
LinkDB
All DBs
Position
Unknown
AA seq
1317 aa
AA seq
DB search
MGTASSLVSPAGTGGEVIEDAYGGGGGEACEIPVEVKPKARLLRSSFRRVGASRPGGLIG
ASFKSTASVQELECMAEYERLKKEYEIFRVSKNNEVASMVKKEAKLDLENKRLRAELQAL
QKTYQKILREKESALEAKYQAMERAATFEHDRDKVKRQFKIFRETKENEIQDLLRAKREL
ETKLQRLQAQGIQVFDPEESDSDDNCTEVTATGAQSEYWTGGVLGSEPSMGSMMQLQQSF
RGPEFAHSSIDVEGPFANINRGDWDAAIASLLQVTPLFSHSLWSNTVRCYLINTDETQPE
VDIFIRNYSPKLQRICETMGYFFQVVHFPVENGNHFQAVRKWEIEKSSLVILFIHLTLPS
CLLEDCEEALLKNPEGKPRLIYRRIEDGKVSSDPVQQLTEQVCYVNKAKLIDHMGGVEEG
AYETYNCVEKIIKQDIFGCESTEVEGKDLGNKEESTAPEEEVFGDVLWDAHDEQEQMEAF
QQASNSTCELGFEKYYERLNDLVAAPAPIPPLLVSGGPGSGKSLLLSKWIQQQQKHSPNT
LILYHFVGRPMSASSESALIIKRLTLKLMQHSWLVSPLTLDPAKLLEEFPRWLEKLSARH
QGSIIIIIDSIDQIQQAEKHMKWLIDPLPVNVRVIVSVNVETCPQAWRLWPTLHLEPLNS
KDVKRLISAECSCADVKLTKEQEKKLEKHCRSATTCNALYVTLLGKMIACAGSAGNIDEI
LQKCFQCQDTVSLYGLILRSVQESMLNDKDKHLMREVLCVISVSHNGVSESELMELYPEL
SCVTLASLVHSLHKMCMLTYGCGLLKFQHLQAWETVRLEYMEEGQNSISTCRGKLIDYFT
VQLSQGRVTWRSADELPWLFQQQGNKQKLHKCLLNLFVSQNLYKRGHFAELLSYWQLVGK
DKSSMAAEYFDSLKQYEKSCEGEESMIRLADLYETLGRFLKDLGLLSQAVAPLQRSLEIR
ETALDPDHPRVAQSLHQLAGVYVQWKKFGNAEQLYKQALEISENAYGAEHPRVARELDAL
ATLYQKQNKYEQAEQLRKKSFKMRQKAARRKGNLFGFALLRQRALQLEELTLGKDTPDNA
RTLNELGVLYYLQNNLETAELFLKRSLEMRERVLGPDHSDCAQSLNNLAALYNEKKHYDK
AEELYERALEIRRRALAPDHPSLAYTVKHLAVLYKKLGKLDKAVPLYELAVEIRQKSFGP
KHPSVATALVNLAVLYCQMKKHIEALPLYECALKIYEDSFGHMHPRVGETLKNLAVLSYE
GGDFEKAAKLYKRAMEIKEAETLLIGGKTASRSSSSGDTFSLRSTLSPNVFLDHGQR
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atggggacagcttcctctctggtgagcccagcgggcaccggaggggaggtgatcgaggat
gcctatgggggaggtggcggcgaagcctgtgagatcccagtggaggtgaagcctaaggct
cgcctgctgcgcagctctttccgccgggtgggtgcttcgcggcctggaggcctcatcggg
gccagcttcaaatccactgcctcggtgcaggagttggagtgcatggctgagtatgagcgt
ctgaagaaagaatatgagatcttccgtgtcagcaagaacaatgaggtggcctctatggtc
aagaaagaagccaagcttgacctggagaacaagagactccgggcagagctccaggctctt
cagaaaacttaccagaaaatacttagagagaaagaaagtgctttagaagccaaatatcaa
gccatggagagagctgctacatttgaacatgaccgggacaaagtcaagagacaattcaag
attttcagagaaactaaggaaaatgagattcaggatttattgagggccaaacgagaactg
gagacaaaacttcagagactgcaagcccaagggatccaagtatttgatcctgaagaatct
gattcagatgacaattgcacagaagttactgctactggagcccaatctgaatattggact
ggtggagtgttgggaagtgagccatcaatgggtagtatgatgcaacttcagcagtctttc
agagggcctgagtttgctcatagttccatagatgtggaaggaccgtttgcaaacataaac
agaggtgactgggatgctgcgattgccagtttattgcaggtcacgccactgttttcccac
tctctgtggagtaacacagtaaggtgctatctcattaatacagatgagactcagcctgaa
gtggacatcttcattaggaactactcaccaaaacttcaaagaatatgtgaaacaatgggg
tacttctttcaagttgttcattttccagtagaaaatggaaatcatttccaggctgtgaga
aaatgggaaattgagaaaagttccttagttattttgttcatacatttaactttgccaagc
tgtttgctggaggactgtgaagaagccttattgaaaaatcctgaaggaaagccccggctg
atttaccgcagaatagaagatggcaaagtcagttcagaccctgtgcagcagttaactgag
caagtttgttatgtgaacaaagcaaagctcattgatcacatgggaggagtggaagaagga
gcgtatgaaacttataattgtgtggaaaagatcattaaacaggatatatttggctgtgaa
agcacagaagtagaaggcaaggatttgggtaataaagaggaatccactgcacccgaggag
gaagtttttggagatgtactgtgggatgcacatgatgaacaagaacagatggaagctttc
cagcaggcttctaactcgacgtgtgaactaggatttgagaagtattatgaacgtctaaat
gatctagtggcagcaccagcacccatcccacctcttcttgtgtctggaggaccaggctct
ggcaaatctcttctcctgtcaaaatggattcaacagcaacagaagcattcaccaaacaca
ctaattctctatcactttgttgggaggccgatgtctgccagttcagaatctgcactaata
attaaacggcttactttaaagctcatgcagcattcttggttagtgtcacctttaacactg
gatccagctaagctcttggaagaatttcctcgttggttggaaaaactttctgctcgtcac
caaggcagcattatcataattattgactctatagaccaaatacagcaagctgaaaaacat
atgaaatggctgatagatcccctgccagtgaatgtaagggtgattgtatctgtgaatgtg
gaaacatgtcctcaggcatggaggttgtggccaactcttcatcttgagccattgaattct
aaagatgtgaaacgtctcattagtgcagaatgtagctgtgcagatgttaaactgaccaaa
gaacaggagaagaaacttgagaaacactgtcgttctgccacaacttgcaatgctttgtat
gtcactcttttgggcaaaatgattgcttgtgctggaagtgcaggaaatattgatgaaatc
cttcaaaagtgtttccagtgtcaagatacagtatcactgtacggacttattctgagatca
gttcaggagtccatgctgaacgataaagacaaacaccttatgagagaggttctctgtgtc
atcagtgttagccacaatggagtgagtgaatcagagctgatggaactttatcccgaacta
tcctgtgtcacgttagcctctctagtacacagtctgcacaagatgtgtatgctgacgtat
ggctgtggtttgctgaagtttcagcacctccaggcttgggaaacggtgagactagaatac
atggaagaaggtcaaaatagtatttctacctgcagaggaaaactaatagactacttcacc
gtgcagctaagtcaaggcagagtgacttggagaagtgccgatgaacttccttggcttttt
caacaacagggcaacaagcagaagctacacaagtgtctcctgaacctctttgtatctcag
aatctttacaaaagggggcattttgcagaattactgagttactggcaacttgttggaaaa
gataagagttcaatggcagcagagtattttgactctctaaagcaatatgagaaaagctgt
gagggagaggaaagtatgatccgtctggctgatctttatgaaactctgggacgattctta
aaagatctaggccttctcagccaggcagttgctcctctgcagcgttctctggaaattcgg
gagactgcactggatccagatcaccccagggtagcacaatccctccatcagttagcagga
gtatatgtgcagtggaaaaagtttggaaatgctgagcagttatataagcaggctctggaa
atctctgaaaatgcttatggagctgaacatcccagggttgctcgtgaactggatgcactt
gcaacgttataccagaaacagaacaaatatgaacaagctgaacagctgaggaaaaaatcc
tttaaaatgcgacaaaaagcagcaaggcggaaaggcaatttgtttggatttgctcttcta
cgtcaacgagccttgcagctggaagagctcacgttaggcaaagacacaccagataatgct
cgaaccctcaatgagcttggagttctctattatctgcagaataatcttgagacagctgaa
ctttttctgaagcgctccctagaaatgagggagagggtcctgggaccagaccactcagac
tgtgcacagtctttgaacaatctggcagctttgtacaatgaaaagaaacactacgataag
gctgaggaactgtatgaaagagctttagaaattaggaggcgagcactagctcctgatcat
ccctcactggcttacactgtgaaacaccttgcagtactctacaaaaagctgggaaagctt
gacaaggcagtgcctctgtatgagttggccgttgaaattcgacaaaaatcatttggtcca
aagcaccctagcgtagctactgccttggtaaacctggctgttctttattgtcagatgaaa
aagcacattgaagccttacctctgtatgaatgtgcattaaagatttatgaagacagtttt
ggtcatatgcatcctcgtgtgggagaaacactaaaaaacttagctgtgttgagctatgaa
ggaggagatttcgagaaagctgccaagctgtacaagagagccatggaaatcaaagaagca
gagactttgttgatcggaggaaaaacagcttcccggtcctcgtcaagtggagacactttc
agtttaagaagtacattatctccaaatgtttttctagaccatggacaaaggtga
DBGET
integrated database retrieval system
