Chelonoidis abingdonii (Abingdon island giant tortoise): 116839957
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Entry
116839957 CDS
T07367
Symbol
HPS3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cabi04131
]
116839957 (HPS3)
Membrane trafficking [BR:
cabi04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
116839957 (HPS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
116839957
NCBI-ProteinID:
XP_032662137
Ensembl:
ENSCABG00000019804
UniProt:
A0A8C0J4S7
LinkDB
All DBs
Position
Unknown
AA seq
1010 aa
AA seq
DB search
MVQLYNLHPFGSQQVVPSKQEPALFCCGRDALLVACAAAGCKVEAFAVGDQELCEPLGCF
NTLGRVLHMAYSEAGDYLVTIEEKNKATFLRAYMNWRCMSTGNTRVCVRMVGHKMEESYS
ESSKVQMSIVEMPLSDPPLCISCCPVNGDLLVGCKNKLVMFCLKYLVINQDLTVLDFKLS
LILHIDNVTPTEVAFCAGYIALTTELDVLILKLEPIHKGADNTELYTDKVRAPEKLVDEG
VKDEVPSAFSSQLESDDFVICQKPMELRGEESRLCGILVTLESTGLAKEDTEYFQVRYLL
YRRFTPDLSSFVFSVEETTLHSLQLLPIYQTESSMSVNGKTAAKKELLSVFCFFSLPHVG
YLYTVGSLVELLSTYQYSEKSLQAVLTPQFLHVITSNSLQCFTVRCSAAAAREEDPYIDT
TMKACPPVSLDVCTLRMQLFIGLKAICHFNNHVILLTKADSEDITERRKPPRRVLSRKAD
SVKLKTPLESEPGWNLYIVNTISTIQLYKEMVDYSKTYENVRTESCIHLLSEAHLLVRAA
LMDPSLMESEEKEKLLAAFRESCAHLGDCYSRFNTKDSHLALPYYKMSGLSITEVLKRID
SVVEGGTQKYEKGFIFYLNHSLYEDLNEELSKESAAKVLQIFHLAEPNQLPHVLCSPCMK
NVCPSMAMKLLQKVELIVPSVVLTLTKAAMALKMGDLEAYKNEMDCYTEMRLAYGFIGEP
RLLMQQRDGRIVPTELAVHLKETWPGLLVASMLALHENSKIELEEADSYFEMLYGKKEGT
TPQLLVDFWEALLVAGSEKEILQKLLFKLTSQYIWRLLRKQLPDTKPLKTTEDLINSCNH
YGLIFPWVTFIMSSGPACDKYPEDLSKLQSLLCGPSVDIASVLPFLEPLSEDSNAGLSVH
VLCTTRVGEYEKSIDKLLEKCPEALIPYAQHELKDENRALWWNKLLPELCKRTRYVGDDY
SVLISSLKETLSVIAMELELRDFINVLPDDGTAAFFLPHLLQCSKKKLTT
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctctacaacctgcacccgttcggctcgcagcaggtggtgcccagcaagcag
gagccggcgctgttctgctgcggccgggacgcgctgctggtggcctgcgcggcggccggc
tgcaaggtagaagcgtttgccgttggcgaccaggagctctgcgagccgctcggctgtttc
aatacgctgggccgggtgctgcacatggcatacagcgaggcgggagattacttggtgaca
attgaggagaaaaacaaggccacgttcctacgagcttatatgaactggagatgcatgtca
acagggaacactcgagtttgtgtccgcatggtgggtcacaagatggaagaatcatacagt
gaatcttctaaagttcagatgtcaattgtggaaatgcctctttcagacccaccattgtgc
atttcgtgttgtcctgtaaatggagatcttcttgttggctgcaaaaataaactggtcatg
ttctgcttgaaatatcttgtcataaatcaggatctgactgtattggattttaaactctct
ttaattttgcacattgataatgtcacccctacagaagtagcattttgtgccgggtacata
gctctaacaacagagttggatgttttaatcctgaagctggaacccattcataaaggtgca
gataatactgaactatatacagataaagtcagagcaccagaaaagcttgtagatgaaggt
gtaaaagatgaagttccctcagccttttcttcccagcttgaatcagatgactttgtcatc
tgtcagaagcctatggaactacgtggggaggaaagcagactatgcggaatactggtaaca
ctggaatcaacagggttagctaaggaagacacagaatatttccaagtgcggtacctccta
tacagacgctttactccagatctgtcatctttcgtcttctctgttgaagagaccacgttg
cactctcttcagctactgcctatttatcagacagaaagttccatgtcagtcaatggaaaa
actgcagccaagaaagaattgctgagtgtcttctgttttttctccttgccgcatgttggg
tatctctataccgttgggagcttagtagagctgctttctacctaccagtactcggaaaaa
tctctgcaggcagttcttaccccacaattcctacatgttattacaagtaacagcttgcag
tgtttcacagtacgatgcagtgcagcagcagctcgtgaggaggacccatacattgataca
accatgaaggcttgcccacctgtgtctctagatgtctgtacattaagaatgcagcttttt
atagggctgaaagctatttgtcacttcaacaaccatgtaatacttctgactaaggcagat
agtgaggatattactgaaagaagaaagcctccaagaagggtcctttccagaaaggctgac
agtgtcaaactcaagactccacttgagtcagaacctggctggaatttatatattgtgaat
actatttcaaccatccagctttacaaagaaatggtagactacagtaagacatatgaaaat
gtaagaacggagagttgcatccatcttctaagtgaggctcacttgttggtcagagcagct
ctaatggatcccagtctgatggaatcagaagagaaagagaagctcctggcagcattcaga
gaaagttgtgctcacctaggagactgttacagcaggtttaacacaaaggattcccatctt
gccctgccttactacaagatgtctggcttatccataactgaagttttgaagagaatagac
tcggtggtagagggtggaacacagaaatatgaaaaaggatttatcttttacttaaatcat
tctctttatgaagatttaaatgaagagttaagcaaagaatcagcagccaaagtgctccaa
atattccatcttgctgaaccaaaccagctgccccatgtgctctgcagtccgtgcatgaag
aatgtttgtccctcgatggcaatgaagcttttgcagaaagtggaactgattgtgccgtca
gttgtattgactctaaccaaagctgccatggctctgaaaatgggagacttagaggcatat
aaaaatgagatggactgttatacagagatgagactggcatatggctttattggggaacca
agacttctgatgcagcagagagatggccggattgttccaaccgaacttgccgttcatctg
aaggagacatggcctgggttgctggtggcttcgatgttggctttacatgagaacagtaaa
atcgaattggaagaagcagactcttacttcgagatgctgtatgggaagaaggaaggtaca
acccctcagctcttagtagacttctgggaagccctccttgtagcaggctctgagaaagaa
atactccagaagctcttattcaagcttacttcacagtatatttggagactattgaggaag
cagcttcctgataccaaaccactgaaaacaacagaggatctgataaactcctgtaatcat
tatgggttaattttcccttgggtgaccttcataatgtcatcgggacctgcatgtgataag
tatcctgaagatctttcaaaactacagtctcttttatgtggtccgtcagtcgacatagct
tcagttctgcctttcttggagccattatcagaagacagtaatgctggtctcagtgtccat
gttctttgcactacgagggtaggagagtatgagaaatccattgacaagctcctagagaag
tgtcctgaagcactcataccgtatgcccagcatgagctgaaagatgaaaatcgggctctg
tggtggaacaaactgcttcctgaactttgtaaacgaaccagatatgttggagatgactac
tccgttctcatctcatcactgaaagaaactttatcagttattgccatggaactggagcta
agggatttcattaatgttctaccagacgatgggactgcagcatttttcctgccacatcta
cttcagtgcagcaaaaagaaattgacgacttaa
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