Caballeronia sp. NK8: NK8_02200
Help
Entry
NK8_02200 CDS
T09553
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
cabk
Caballeronia sp. NK8
Brite
KEGG Orthology (KO) [BR:
cabk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cabk03021
]
NK8_02200 (rpoH)
Transcription machinery [BR:
cabk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NK8_02200 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_3
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
BCQ22112
LinkDB
All DBs
Position
1:complement(227230..228171)
Genome browser
AA seq
313 aa
AA seq
DB search
MSVTNAMTLPNVLSSAPAKASSAGALTYAQSSMLTGQIGNIDSYIQAVNRIPMLSQAEER
QYATEFREQGNLNAARQLVLSHLRLVVSIARNYLGYGLPHADLIQEGNIGLMKAVKRFDP
EQNVRLVSYAMHWIKAEIHEYILRNWRMVKVATTKAQRKLFFNLRSHKTSHSAFTPDEIE
GLASELNVKREEVAEMETRLSGGDIALEGQIDDGEEAFAPIAYLADSHNEPTNVIAARQF
DKLQSDGLADALESLDERSRRIIKARWLDVQDDGSGGKTLHELADEFGVSAERIRQIEAS
AMKKMRSALHDYA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgaccaatgcgatgacccttccgaatgttctgagctcggcacctgccaaggca
tcttcggcaggcgcgctgacgtacgcacagtcgtcgatgctgaccggccagatcggcaac
atcgattcctatatacaagcagtgaaccgcattccgatgctttcgcaagcagaggaacgt
cagtacgccaccgaattccgcgagcagggcaacctgaacgccgcgcgccagctcgtgctt
tcgcacttgcgcctcgtagtgtcgatcgcccgcaactaccttggctacggcctgccgcac
gcagacctgatccaggaaggcaacatcggtctgatgaaggccgtgaagcgcttcgacccc
gagcaaaacgtacgcctggtttcgtacgcgatgcactggatcaaggccgagatccacgag
tacatcctgcgcaactggcgcatggtgaaggtcgccacaaccaaggcgcagcgcaagctg
ttcttcaacctgcgcagccacaagacgagccattcggcgttcacgccggacgagatcgaa
ggtctcgcgagcgagctgaacgtgaagcgcgaggaagtcgcggagatggaaacgcgcctg
tcgggcggcgatatcgcgctcgaaggccagatcgacgacggcgaggaagcattcgcgccg
atcgcctatcttgcagactcgcacaacgagccgacgaacgtcatcgccgcgcgccagttc
gacaagctgcaaagcgacggactcgccgacgcgctggaatcgctcgatgagcgcagccgc
cgcatcatcaaggcgcgctggctcgacgtgcaggacgatggctcgggcggcaagacgctg
catgaacttgccgacgagttcggcgtgtcggcggaacgcatccgccagatcgaagcgagc
gcgatgaagaaaatgcgctccgcgctgcacgactacgcgtaa
DBGET
integrated database retrieval system
