Caballeronia sp. NK8: NK8_07130
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Entry
NK8_07130 CDS
T09553
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
cabk
Caballeronia sp. NK8
Pathway
cabk00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cabk00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NK8_07130 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cabk01007
]
NK8_07130 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cabk03016
]
NK8_07130 (serS)
Enzymes [BR:
cabk01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
NK8_07130 (serS)
Amino acid related enzymes [BR:
cabk01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
NK8_07130 (serS)
Transfer RNA biogenesis [BR:
cabk03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
NK8_07130 (serS)
Prokaryotic type
NK8_07130 (serS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DUF5129
DUF7491
Motif
Other DBs
NCBI-ProteinID:
BCQ22602
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Position
1:771987..773285
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AA seq
432 aa
AA seq
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MLDIQTLRKDLDGVAKRLADRGYALDVAAFAALETERREIQTRTEELQARRNSLSKQIGA
MKGRGEDTSAVMAEVGGIGDTMKESAAKLDDVQKRLSDLMLTVPNLPHESVPVGNDETQN
VEVRRWGTPRAFDFEVRDHVDVGAPLGLDFETGAKLSGARFTLLRGQIARLHRALAQFMI
DTHTEQHGYTEAYTPYIVNPEILYGTGQLPKFADDMFRVEKGGDENTVTQYLISTSEISL
TNTVRDSILEADALPVKLTAHSPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQVVSPEHSY
AALDEMVGQAETILQKLELPYRVITLCTGDMGFSAAKTFDLEVWLPAQNTYREISSCSNT
EAFQARRMQARFRNAQGKPEFVHTLNGSGLAVGRTLVAVLENFQNADGSVTIPAVLRPYM
RGAERIEVSAVV
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacatccaaaccctccgcaaagacctggacggcgttgcgaagcgcctcgccgat
cgaggctacgcgctcgacgtcgccgcctttgccgcgctcgaaaccgagcgccgcgagatc
cagacccgcaccgaagaactgcaggcgcgccgcaacagcctgtcgaaacagatcggcgcg
atgaaggggcgcggcgaggacacgtcggcggtgatggcggaagtgggcggcatcggcgac
acgatgaaggaatcggcggcgaagctggacgatgtgcagaagcggctgtccgatctgatg
ctgacggtgccgaacctgccgcacgaaagcgtgccggtcggcaacgacgagacgcagaac
gtcgaagtgcggcgctggggcacgccgcgcgcgttcgacttcgaagtccgcgatcacgtc
gatgtcggcgcgccgctcggcctcgacttcgaaaccggcgcgaagctctcgggcgcgcgc
ttcacgctgctgcgcggacagatcgcgcggctgcatcgcgcgctcgcgcagttcatgatc
gacacgcacacggaacagcacggttataccgaggcgtacacgccgtacatcgtgaatccg
gagattctctacggcacgggccagttgcccaagttcgccgacgacatgttccgcgtcgaa
aagggcggcgacgagaacacggtcacgcagtacctcatttcgacctcggagatttcgctc
acgaataccgtgcgcgacagcatcctcgaagcggatgcgctgccggtcaagctcaccgcg
cattcgccgtgcttccgctcggaagcgggctcgtacgggcgcgatacgcgcggcctgatc
cgccagcatcaattcgacaaggtcgagatggtgcaggtcgtgtcgccggagcattcctat
gccgcgctcgacgagatggtcgggcaggcggagacgattctgcagaagctggaactgccg
tatcgcgtgatcacgctgtgcacgggcgacatgggcttttcggcggcgaagacgttcgat
ctcgaagtgtggctgccggcgcagaacacgtatcgcgagatttcgagctgctcgaacacc
gaggcgttccaggcgcgtcgcatgcaggcgcgcttccgcaatgcgcagggcaagccggag
ttcgtgcatacgctgaacggttcgggtctggcggtcggccgtacgctcgtcgcggtgctg
gagaacttccagaatgcggacggctcggtgacgattccggccgtgttgcgtccgtatatg
cgcggtgcggaaagaatcgaagtttccgcagtagtgtga
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