Caballeronia sp. NK8: NK8_09010
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Entry
NK8_09010 CDS
T09553
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
cabk
Caballeronia sp. NK8
Pathway
cabk02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cabk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NK8_09010 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cabk02000
]
NK8_09010 (msbA)
Enzymes [BR:
cabk01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
NK8_09010 (msbA)
Transporters [BR:
cabk02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NK8_09010 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
DEAD
AAA
AAA_22
AAA_29
ABC_ATPase
RsgA_GTPase
AAA_25
AAA_30
NACHT
AAA_24
Zeta_toxin
AAA_28
AAA_21
cobW
nSTAND3
TsaE
PsbY
Motif
Other DBs
NCBI-ProteinID:
BCQ22783
LinkDB
All DBs
Position
1:962605..964332
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AA seq
575 aa
AA seq
DB search
MAVMRRLWPYIRPLMGMVLLGLLTMGIVAATEAGIPMLLKPLLDHGFGSKSSDHAKWLVP
AAVIGLALLRGSAQYASGYFLSYVTNKILLQLRLEMFHRMIHTSAGFFQRETASTIINAI
VFEVNQILSVLQSVVVTLVRDSLTVVFLLGYLFILNWRLTLIVAVILPAIGWLVSKINRR
LRRLNREHQTLTNELSYIVEETVGGYKVVKVHNGEPYETGRFTEMSHRLRGYAMRMQVSG
GLAQPLTQFLASIALAIVITIAVVQSANDQTTVGGFVAFVTSMLLVISPLKHLIDINQPL
QRGMTAAELIFGLIDEPAEPEGGGRRLPRARGEVEFRDVTFSYGSIDRPTLDRVSFKVAP
GEMVALAGPSGSGKTTLVNLLPRFFDPRDGQVLVDGVPITDYNLHDLRGQLAMVSQDVVL
FNDTIAANVAYGQTPERERVMSALAAANLSDMVATLPEGIDTLIGGNGMRLSGGQRQRLA
IARAIYKDAPILILDEATSALDSESERHVQAALETLMKGRTTLVIAHRLSTIERADRILV
METGKIAEQGSHAELLRKGGLYAHLHRIQYQQQAA
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcatgcggcggctatggccgtatatccggccgctcatgggcatggtgctgctc
ggcctgttgacgatgggcatcgtcgccgcgaccgaagcaggcattccgatgctgctcaaa
ccgctgctcgaccacggcttcggctcgaagagcagcgatcacgcgaaatggctcgtgccg
gccgcggtcatcgggctcgcgcttctgcgcggctcggcgcagtacgcatcgggctatttt
ctttcgtacgtgacgaacaagatcctgctgcaactgcggctcgagatgttccatcgcatg
atccatacgagcgcgggcttcttccagcgcgaaaccgcgagcacgatcatcaacgcgatc
gtcttcgaggtgaatcagatcctgagcgtgctgcagagcgtcgtcgtcacgctcgtgcgc
gactcgctcacggtcgtgtttctgctcggctatctgttcatcctcaactggcgcctcacg
ctgatcgtcgcggtgattctgccggctatcggctggctcgtcagcaagatcaaccggcgg
ctgcggcgcctgaaccgcgagcatcagaccctgaccaacgagctgtcgtatatcgtcgag
gagacggttggcggctacaaggtcgtgaaggtgcataacggcgagccgtacgagaccggc
cgcttcaccgagatgagccatcgcctgcgcggctacgcgatgcgcatgcaggtgtcgggc
ggcctcgcgcagccgctcacgcagtttctcgcgtcgatcgcgctcgccatcgtcatcacg
atcgcggtcgtgcagtcggcgaacgaccagacgacggtcggcggcttcgtcgcgttcgtc
acgtcgatgctgctcgtgatctcgccgctcaagcatctgatcgacatcaaccagcccttg
cagcgcggcatgacggcggcggagctgatcttcggcctgatcgacgagcccgcggagccc
gaaggcggcgggcggcgtctgccgcgcgcgcgcggcgaggtcgaattccgcgatgtcacc
ttcagctacggctcgatcgaccgtccgacgctcgatcgcgtgtcgttcaaggtcgcgccg
ggcgagatggtcgcgctcgcggggccgtcgggcagcggcaagaccacgctcgtgaatctg
ctgccgcgcttcttcgatccgcgcgacggtcaggtgctggtcgacggcgtgccgatcacc
gactacaacctgcacgacctgcgcggccagctcgcgatggtcagccaagacgtcgtgctc
ttcaacgatacgatcgcggcgaacgtcgcatacgggcagacgccggaacgcgagcgcgtg
atgtcggcgctcgcggcggcgaatctgtcggatatggtggcgaccttgcccgaaggcatc
gatacgctgatcggcggcaatggcatgcggctgtcgggcggtcagcgtcagcgtctcgcg
atcgcgcgcgcgatctacaaggacgcgccgatcctgattctcgacgaagcgacctcggcg
ctggattcggaatcggagcgccacgtgcaggctgcgctcgaaacgctgatgaaggggcgc
acgacgctcgtcatcgcgcatcgtctgtcgaccatcgaacgcgcggaccgcatcctcgtg
atggagacggggaagatcgcggagcagggcagccacgcggagttgttgcgcaaaggcggc
ctgtatgcacatttgcatcggattcagtatcagcagcaggcggcgtga
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