Caballeronia sp. NK8: NK8_09280
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Entry
NK8_09280 CDS
T09553
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
cabk
Caballeronia sp. NK8
Pathway
cabk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cabk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NK8_09280 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cabk03400
]
NK8_09280 (recC)
Enzymes [BR:
cabk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NK8_09280 (recC)
DNA repair and recombination proteins [BR:
cabk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NK8_09280 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
BCQ22810
LinkDB
All DBs
Position
1:995754..999158
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AA seq
1134 aa
AA seq
DB search
MLELFYSNRHETLAAALFEDLDAFAMRESDPFAREAVIVPSAAVRRRLELDMAERFGICA
NVDFCYLAQWLWAQIGRVLPVPAHSPFAPDRLAWRCYRLFEDPSFGDSARLSTYLSAADD
SMRYELARRIATVFDHYLTYRPEWLTHWQAGGSILAGSGTEIDARGPRLAGANDIQREDE
RWQAALWRALLADLARDTDADGEAKDPTPPAYRFLADAPELDLDAVMRAQWPRRISVFAL
PTMPPLHIALLRELSRWIDVRVYAQNPCREFWFDIVSEARVEQLELKGEADFQEVGHPLL
AEWGRQTQAQLHMLHELTERAASSERQLFEDNAAPTWLARVQNGILALDDENAGPEPEDI
VETGIEVHVCHSLSRQLEVLHDRLLDWFDTIEGLEPSDVLVAFPDLAVAGPLIDGIFGTA
PAGASNERRRIPYRITGLPPSQANPVARALIDWLALTERSVGAPELVEWLRVDAIAARYG
IDAIALETAQAWLAAAGARRGLRPDDVTADDVPAARHTFSDALTRLYLGYALPGGGAPVA
EWLPIEGANGSDAELLGRLTRFVDDIDAFAERIATPRTARAWGDLLRDALERFFDAGVAF
TDSVGDVRRAIDALIVAMDEGAGATEVSAAVIRTALTDTLDDPARGGVPWGGVTFSSLTS
LRGLPYRVVCLLGMDDGMLPSLTRADEFDLMARFGKLGDRQRRDDERNLFLDLVLAARDR
LMIAYTGRSIRDNAVLPPAALIDELLDYLARSVAGKHASPDELGQARAGFVFEHPLQPYA
PDYFHQDGRLFTYEPERAELAHALESGKTQPVARFFSTPLPQEEDVQTVAFDDFVRFWRH
PARALLRDRLGIALVDAEAELDANEPFELGFAGRDALAARVLPALLEAAEDGDRAARERA
RRVARASPEMPGGATGGVWQARELHALGLLAERVRASTAAGVERLPFSLDLAPRWPDTAG
VALFGAYDDALVDVRPMTLVGTLNALTPQGQVIYRYDAPRARDYLSAWLAHLAYCAALPE
GPRRTIWHGRGAQSADFELTPVADPLAHLAALAALYRAGRRMPLRFFPKSAWLKVKEGDS
KAQAAWESERTRAESDDPVFRIAFRGTDLALDDTFAAFARIVYDPLVQHLRSGA
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaactcttctactcgaaccgtcacgagacgctcgccgccgcgctcttcgaagac
ctcgacgccttcgcgatgcgcgagagcgatcccttcgcgcgcgaagccgtcatcgtgccg
agcgccgccgtgcgccggcggctcgaactcgacatggccgagcgcttcggcatctgcgcg
aatgttgatttttgttatctcgcgcaatggctatgggcgcagatcgggcgcgtgctgccc
gtgcccgcgcattcgccgttcgcgccggaccggctcgcgtggcgctgctaccggctgttc
gaagatccgtcgttcggcgattcggcgcggctgtccacgtatctgagcgccgccgacgat
tcgatgcgctacgaactcgcgcggcgcatcgcgacggtcttcgaccactatctgacgtat
cgccccgaatggctcacgcactggcaggcgggcggctcgattctggcgggcagcggcacg
gagatcgatgcgcgcggcccgcgtctggccggcgcgaacgatatccagcgcgaggacgaa
cgctggcaggccgcgctctggcgcgccttgctcgcggacctcgcgcgcgacacagacgcc
gacggcgaagcgaaagacccgacgccgcccgcctaccgctttctcgccgatgcccccgaa
ctcgatctcgacgccgtcatgcgcgcgcaatggccgcgccgcatcagcgtgttcgcgctg
ccgacgatgccgccgctgcatatcgcgctgttgcgcgagttgtcgcgctggatcgacgtg
cgtgtctatgcgcagaatccttgccgcgagttctggttcgacatcgtgagcgaggcgcgc
gtcgagcaactggaactgaagggtgaagcggactttcaggaagtcggtcatccgctgctc
gcggagtggggacggcagacgcaggcgcaactgcacatgctgcacgaactgaccgagcgc
gcggcgtcgagcgagcggcagcttttcgaagacaacgccgcgcccacgtggctcgcgcgc
gtgcagaacggcatcctcgcgctcgacgacgagaacgccggaccggagcctgaggacatc
gtcgagaccggcatcgaagtgcacgtgtgtcacagcctgtcgcgccagctcgaagtgctg
cacgaccgcctgctcgactggttcgacaccatcgaaggtctcgagccttcggacgtgctg
gtcgcgtttccggatctcgcggtggcgggaccgctcatcgacggcattttcggcaccgcg
ccggcgggcgcgagcaacgagcggcggcgcattccttatcgcatcacgggtttgccgccg
tcgcaggcgaatcccgtcgcgcgtgcgctcatcgactggctcgcgctcaccgaacgcagc
gtcggcgcgcccgaactcgtggaatggctgcgcgtggacgcgatcgcggcgcgctacggc
atcgacgccatcgcgctcgaaaccgcgcaggcgtggctcgcggccgcgggcgcgcggcgc
ggcttgcgcccggacgacgtcacggccgacgacgtgcccgccgcgcgtcacacgttctcc
gatgcgctgacacgtctctatctcgggtacgcgctgccgggcggcggcgcaccggtggcc
gaatggctgccgatcgaaggcgcgaacggctcggacgccgaactgctcggccgcctcacg
cgcttcgtcgacgacatcgacgcgttcgccgaacgcatcgcgacgccgcgcacggctcgc
gcctggggcgatctgctgcgcgatgcgctcgaacgtttcttcgacgcgggcgtcgccttc
accgattcggtcggtgacgtgcgccgcgcgatcgatgcgctcatcgtcgcgatggacgaa
ggcgcgggcgcaaccgaggtttccgccgccgtgatccgcacggcgctcaccgatacgctc
gacgatcccgcgcgcggcggcgtgccgtgggggggcgtcacgttctcgtcgctgacgagc
ctgcgcgggttgccgtatcgcgtggtctgcctgctcggcatggacgacggcatgttgccg
agcctcacgcgcgccgacgagttcgacctgatggcgcgcttcggcaagcttggcgaccgc
cagcgccgcgacgacgagcgcaacctgtttctcgatctcgtgctcgcggcgcgcgaccgg
ctgatgatcgcgtacacggggcgcagcatccgcgacaacgccgtgctgccgcccgccgcg
ttgatcgacgaactgctcgactatctggcgcgctccgtcgccggcaagcatgcgagtccg
gatgaactcgggcaagcgcgcgcgggcttcgtcttcgagcatccgttgcagccttatgcg
cccgattatttccatcaggatggccggctcttcacctacgaacccgagcgtgccgaactt
gcccacgcgctggagtcgggcaagacgcagcctgtcgcgcgatttttctccacgcccttg
ccgcaggaagaggacgtgcagaccgtcgccttcgatgatttcgtgcgcttctggcgccat
cccgcgcgcgcgcttctgcgtgaccggctcggcatcgcgctggtggacgccgaggccgaa
ctcgacgccaacgagccgttcgaactgggcttcgcgggtcgcgacgcgcttgccgcgcgc
gtgttgcccgcgctgctcgaagccgccgaagatggcgaccgcgccgcgcgcgaacgtgcg
agacgcgtcgcgcgcgcgagtccggaaatgccgggcggcgcgacaggcggcgtgtggcag
gcgcgcgagctgcatgcgctgggtcttctggcggagcgcgtgcgcgcgtcgacggcggcg
ggcgtcgagcgtctgccgttctcgctcgatctcgcgccgcgctggcccgacacggccggt
gtcgcgctgttcggcgcctatgacgacgcgctcgtcgacgtgcggccgatgacgctcgtc
ggcacgctcaacgcgctgacgccgcagggccaggtgatctatcgctatgacgcgccgcgc
gcgcgcgattacctgtccgcatggctcgcgcatcttgcctactgcgcggcgctgcccgaa
gggccgcgccgcacgatatggcacggacgcggtgcgcaatcggcggatttcgagttgacg
cccgtcgccgatccgctcgcgcatctggcggcgcttgcggcgctgtatcgcgccggacgg
cgcatgccgctcagattctttccgaagagcgcgtggctcaaggtgaaggagggcgattcg
aaagcgcaggccgcgtgggaatccgaacgcacgcgcgccgaatccgatgaccccgtattt
cgcatcgcgttccgaggcacggacctcgcgctcgacgacactttcgccgcattcgcgcgc
atcgtgtacgacccgctcgtgcaacatctgcggagcggcgcatga
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