Caballeronia sp. NK8: NK8_16050
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Entry
NK8_16050 CDS
T09553
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
cabk
Caballeronia sp. NK8
Brite
KEGG Orthology (KO) [BR:
cabk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cabk03009
]
NK8_16050 (der)
Ribosome biogenesis [BR:
cabk03009
]
Prokaryotic type
GTPases
NK8_16050 (der)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
AAA_22
RsgA_GTPase
ABC_tran
AAA_24
Roc
Ras
NTPase_1
ATP_bind_1
AAA_14
AAA_29
Septin
FtsK_SpoIIIE
Tsr1_G-like
Motif
Other DBs
NCBI-ProteinID:
BCQ23476
LinkDB
All DBs
Position
1:complement(1681167..1682507)
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AA seq
446 aa
AA seq
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MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRLGGERPYLVVDTGG
FEPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKAIADYLRKTGRPLFLVVN
KAEGMKYTAVASDFYELGLGDPRAISSAHGDGVLEMINDALDLAYKDQPEESEEEKAQHG
VKIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTTRDSIYVDFERQGRKYTLIDTAGLRR
RGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISEQDAHIAGFVVEQGRALVVGVNK
WDGLDSHVRERTKADLTRKLKFLDFAKFHYVSALEKTGIGALMKSVDDAYAAAMAKLPTP
KLTRALIDAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVVHGNALDAITDTYKRYLEGRF
RETFGLAGTPLRIEFRSSRNPYADKE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccgtgattgccctcgtcgggcgccccaatgtggggaaatcgacccttttcaac
cggctcacgcgctcgcgcgacgcgctcgtcgcggacttgcccggcctgacccgcgaccgc
cattacggcgaaggccgtctgggcggcgagcggccgtatctcgtggtggacacgggcggc
ttcgagccggtggcgaaggacggcatcctgcacgagatggcgcgccagacgcgccaggcg
gtcgaagaagccgacgtcgtcgtgttcatcgtcgacgggcgcaacggcctcgcgccgcag
gacaaggcgatcgccgactatctgcgcaagaccggccggccgctctttctggtcgtgaac
aaggcggagggcatgaagtacacggcggtcgcgtcggacttctatgaactcggccttggc
gacccgcgcgcgatctcgtccgcgcacggcgatggtgtcctcgagatgatcaatgacgcg
ctcgatctcgcgtacaaggatcagccggaagaatcggaagaagagaaggcgcagcacggc
gtgaagatcgcgatcgtcggacgtccgaacgtcggcaagtcgacgctcgtgaacacactg
atcggcgaggagcgcgtgatcgcgttcgatatgcccggcaccacgcgcgattcgatctat
gttgatttcgagcggcaaggccgcaaatacaccttgatcgacacggccggcctgcgtcgc
cgcggcaaggtgttcgaagcgatcgaaaagttctcggtcgtgaagacgctgcagtcgatc
tcggacgccaatgtcgtgatcctgctgctcgatgcgcagcaggacatttcggaacaggac
gcgcacatcgcgggtttcgtggtcgaacaggggcgcgcgctggtcgtgggcgtgaacaag
tgggacgggctggattcgcatgtgcgtgagcgcacgaaggcggacctcacgcgcaagctc
aagtttttggactttgctaaattccactacgtttccgcgctggagaagacgggcatcggc
gcattgatgaaatcagtcgacgatgcctacgccgccgcgatggccaagctgccgacgccg
aagctcacgcgcgcgctgatcgatgcggtggaattccagcaaccgcgccgccgcggcccg
gtgcggccgaagctgcgttacgcgcaccagggcgggcagaatccgccgatcatcgtcgtg
cacggcaacgcgctcgacgcgatcacggatacctacaagcgttatctggaagggcgtttt
cgcgaaacttttgggctcgccggcactccacttcgcatagagttccggtcgagccggaat
ccttacgcggacaaggagtga
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