Caballeronia sp. NK8: NK8_16880
Help
Entry
NK8_16880 CDS
T09553
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cabk
Caballeronia sp. NK8
Brite
KEGG Orthology (KO) [BR:
cabk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cabk03016
]
NK8_16880 (truB)
Enzymes [BR:
cabk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NK8_16880 (truB)
Transfer RNA biogenesis [BR:
cabk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NK8_16880 (truB)
Prokaryotic type
NK8_16880 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BCQ23557
LinkDB
All DBs
Position
1:complement(1780113..1781051)
Genome browser
AA seq
312 aa
AA seq
DB search
MGGPKNEARPKIPRRALDGVLLLDKPLGLSSNDALIKAKRLYLAKKAGHTGTLDPLATGL
LPLCFGEATKFSQDLLEADKSYEATMRLGVRTTTGDAEGEAIDTRDVTCDEAAVAEALTK
FLGDIVQVPPMYSALKRDGKPLYEYARAGQTVEREGRQVTIHALQLISCALPLVTFRVTC
SKGTYVRTLAEDIGETLGCGAHLTALRRTGVGALTLEHAVTLDQLGSLTEAERDERLQPV
DALLSTFPAVQLNDDAARRFLHGQRLRLADVVESRLEAGRVRVYSQEGGRLLGVARAGEG
VLAPERLIVTAQ
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgggcggtccgaagaacgaagcgcggccgaagatcccgcgccgcgcgctcgatggcgtg
ctgctgctggacaagccgctcgggctgtcgagcaacgatgcgctgatcaaggcgaagcgg
ctttatctggcgaagaaggcgggccacacgggcacgctcgatccgctcgcgacgggtttg
ctgccgctgtgtttcggcgaggcgacgaagttttcgcaggatctgctcgaggccgacaag
tcctacgaagcgaccatgcgcctgggcgtgcgcacgacaacgggcgatgccgaaggcgag
gccatcgatacgcgcgacgtaacgtgcgacgaagcggcggttgccgaagcgctgacgaag
tttctgggcgacatcgtgcaggtcccgccgatgtattccgcgctgaaacgcgatggcaag
ccactctacgaatacgcgcgcgcagggcagacggtagagcgcgaaggtcgccaggtgacg
attcacgcgttgcagttgatctcatgcgcgttgccgctcgtcacgtttcgcgtgacgtgc
agcaagggcacgtatgtgcgtaccctggccgaggacatcggcgagacgctgggttgcggc
gcgcatctgacggcgttgcggcgcacgggcgtcggcgcgttgacgctcgaacacgcggtg
acgctcgatcaactcggcagtctgaccgaagccgagcgcgatgaacgccttcagcctgtc
gacgcgttgttgtccacgtttcccgccgtgcaactgaacgacgacgcggcgcgacgcttt
ctgcacggccagcgcctgcggctcgcggatgtcgtggaatcgcgactcgaagccggtcgc
gtgcgtgtctattcgcaagagggcggacgcctgctcggcgtcgcgcgcgcgggcgagggc
gtactcgcgcccgaacggctgatcgtcacagcgcaataa
DBGET
integrated database retrieval system
