Caballeronia sp. NK8: NK8_18840
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Entry
NK8_18840 CDS
T09553
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cabk
Caballeronia sp. NK8
Pathway
cabk03420
Nucleotide excision repair
cabk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cabk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NK8_18840
03430 Mismatch repair
NK8_18840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cabk03400
]
NK8_18840
Enzymes [BR:
cabk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NK8_18840
DNA repair and recombination proteins [BR:
cabk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NK8_18840
MMR (mismatch excision repair)
Other MMR factors
NK8_18840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BCQ23741
LinkDB
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Position
1:complement(1977148..1979577)
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AA seq
809 aa
AA seq
DB search
MIGPPPEFSLARFSAVALSLMPDLLANLNPEQLAAVTLPNEPALILAGAGSGKTRVLITR
IAWLIQQGYASPPTVLAVTFTNKAAREMMARLSALLPIDTRGMWIGTFHGLCNRMLRAHY
RDAGLPQTFQILDTSDQLSAIKRLMKGLNVDDEKYPAKNLQYFINNAKEQGLRPKDVDAT
DAFNRKFVELYDAYDQQCQREGVVDFPELLLRCHELLAHNPPLRAHYQARFRNILVDEFQ
DTNKLQYAWLKLLAGEHNAIFAVGDDDQSIYAFRGANVGNMHDFEREFRVRNLIKLEQNY
RSHGHILDTANYLIANNSRRLGKNLRTDAGHGEPVRVYEAATDSQEAGWIVEEIKALINT
GLSRGEVAVLYRSNAQSRTIEHTLVNAGIPYRVYGGLRFFERQEVKHALAYLRLIDNPND
DTAFARVVNFPTRGIGARSIEQVADAARLYNCSMAAAVPYVTGKAGSSLGAFATLIAKMR
AETQQMSLPETVEYVVRASGLAAFYETEREGQDRLENLQELVNAAAAFVSEEGYGLDTPA
RSIPLRPGATAAPEIAAVSEDGEIEVLDAPGIADPAQNPDTMTPLAGFLSHASLEAGDNQ
AQAGQDAVQLMTVHAAKGLEFTAVFITGLEEGLFPHENSAQETDGLEEERRLAYVAITRA
KERLYLSFAQSRMLHGQTRYNIRSRFFDELPEGSLKWLTPKVEAGARWGGRADNAGWGRD
WFARPGQERGGSSSYGGVQASATLPAFANEQRAAESGFKVGQAVFHTKFGEGTVTALEGS
GGDARAQVRFKRHGEKWLALAVAKLQAVE
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgatcggcccgccgccagagttttctctggcccgcttttctgccgtcgcactttccctc
atgcccgacctgctcgcgaatctgaaccccgaacaactcgccgccgtgacgctgccgaac
gagcccgcgctcattctcgcgggcgccggcagcggcaagacgcgcgtgctcatcacgcgt
atcgcgtggctgatccagcagggctacgcgtcgccgccgaccgtgctggccgtcaccttc
acgaacaaggccgcgcgcgagatgatggcgcgtctctccgcgctcctgcctatcgacacg
cgcggcatgtggatcggcacctttcacggcctgtgcaaccgcatgctgcgcgcgcattac
cgcgacgccggcctgccgcagaccttccagatcctcgatacgtccgaccagctttcggcc
atcaagcgtctgatgaagggcctgaatgtcgacgacgaaaagtatcccgccaagaacctg
cagtacttcatcaacaacgcgaaggaacagggcctgcgtccgaaggacgtcgacgccacc
gatgcgttcaaccgcaagttcgtcgaactgtacgacgcgtacgaccagcagtgccagcgc
gaaggcgtcgtcgattttccggaactgctgctgcgctgtcatgaattgctcgcgcacaat
ccgccgctgcgggcgcattatcaggcgcgctttcgcaacattctcgtcgacgagtttcag
gacaccaacaagctgcaatacgcctggctcaagctgctcgcgggcgaacacaacgcgatc
ttcgcggtcggcgacgacgaccagtcgatctacgcgtttcgcggcgcgaacgtcggcaac
atgcacgatttcgagcgtgaattccgcgtgcgcaatctcatcaagctggagcagaactac
cgctcgcacggccatattctcgacacggcgaactatctgatcgcgaacaactcgcggcgg
ctcggcaagaatctgcgcaccgacgcgggccacggcgagccggtgcgcgtctacgaggcc
gcgacggattcgcaggaagcgggctggatcgtcgaggaaatcaaggcgctcatcaatacg
ggtctgtcgcgcggcgaagtcgcggtgctttatcgcagcaacgcgcagtcgcggaccatc
gaacatacgctcgtgaacgcgggcattccgtatcgcgtgtatggcggcctgcgcttcttc
gagcggcaggaagtgaagcacgcgctcgcgtatctgcgcctgatcgacaacccgaacgac
gacaccgcgttcgcacgcgtcgtcaatttcccgacgcgcggcatcggtgcgcggtcgatc
gagcaagtggccgacgccgcgcgtctctataactgttcgatggcggcggccgtgccgtac
gtcaccggcaaggcgggctcgagcctcggcgcgttcgcgacgctcatcgcgaagatgcgc
gccgaaacgcagcagatgagcctgccggagacggtcgaatatgtggtgcgcgcgagcggt
ctcgccgcgttctacgaaaccgagcgcgaaggccaggatcgtctggagaacttgcaggaa
ctcgtgaacgcggctgcggcgttcgtcagcgaggaaggctacggcctcgatacgcccgcg
cgctcgatcccgctgcgtccgggcgcgaccgccgcgccggaaatcgcggcggtgagcgag
gacggcgagatcgaagtgctcgacgcgcccggcatcgccgaccccgcgcagaatcccgac
accatgacgccgctcgccgggttcctgtcgcatgcatcgctcgaagccggcgacaaccag
gcgcaggccggacaggacgccgtgcaactgatgaccgtgcacgcggcgaagggtctcgaa
ttcaccgccgtgttcatcaccgggctggaagagggcctgtttccgcacgagaacagcgcg
caggaaaccgacgggctggaggaagagcggcggctcgcctatgtggcgatcacgcgcgcg
aaggagcggctctatctgtcgttcgcgcaaagccgcatgctgcacgggcagacgcgctac
aacatccgctcgcgcttcttcgacgaattgcccgaaggctcgctcaagtggctcacgccg
aaggtcgaggcgggcgcgcgctggggcggacgcgcggacaacgccggctggggccgcgac
tggttcgcgcggcccggacaggagcgcggcggttcctcgtcctacggcggcgttcaggcg
agcgcgacgctgcccgcgttcgcgaacgagcagcgcgcggcggaatccggcttcaaggtc
ggccaggccgtgttccatacgaagttcggcgaaggcaccgtgaccgctctcgaaggctcc
ggcggcgatgcgcgcgcgcaggtgcgcttcaagcgccacggcgagaagtggctcgcgctg
gcggtcgcgaagctgcaggctgtcgaatga
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