Caballeronia sp. NK8: NK8_19570
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Entry
NK8_19570 CDS
T09553
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cabk
Caballeronia sp. NK8
Pathway
cabk03030
DNA replication
cabk03430
Mismatch repair
cabk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cabk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NK8_19570 (dnaQ)
03430 Mismatch repair
NK8_19570 (dnaQ)
03440 Homologous recombination
NK8_19570 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cabk03032
]
NK8_19570 (dnaQ)
03400 DNA repair and recombination proteins [BR:
cabk03400
]
NK8_19570 (dnaQ)
Enzymes [BR:
cabk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NK8_19570 (dnaQ)
DNA replication proteins [BR:
cabk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NK8_19570 (dnaQ)
DNA repair and recombination proteins [BR:
cabk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NK8_19570 (dnaQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BCQ23812
LinkDB
All DBs
Position
1:2059855..2060592
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AA seq
245 aa
AA seq
DB search
MRQLILDTETTGLNARTGDRIIEIGCVELVNRRLTGNNLHLYVNPGRDSDPGALAVHGLT
TEFLSDKPKFAEIAAQLRDFIAGAELIIHNAPFDVGFLDMEFAQLGLPKVSETCGGVIDS
LAQAKQMFPGKRNSLDALCDRFGISNAHRTLHGALLDSELLAEVYLAMTRGQESLVIDML
GDQQASGSVSTSRIAFDDLDLPVLAASAEELAAHEAVLTGLDKAVKGTSVWRTEPAPAEG
DAVPA
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgcgccaactgatactggacaccgaaaccaccggcctgaacgcgagaacgggcgaccgg
atcatcgaaatcggctgcgtcgagctggtgaatcgccggctgaccggcaataacctgcac
ctctacgtgaaccccgggcgcgacagcgatcccggcgcgctcgcggtgcacggcctcacc
accgaattcctgagcgacaaaccgaagttcgcggagatcgccgcgcaactgcgcgacttc
atcgccggcgcagagctgatcatccataacgcgcccttcgacgtcggctttctcgacatg
gagttcgcgcaactcgggctgccgaaagtctcggagacatgcggcggcgtgatcgactcg
ctcgcgcaggccaagcagatgttccccggcaagcgcaattcactcgatgcgctgtgcgac
cgcttcggcatcagcaacgcgcatcgcacgctgcacggcgcactgctcgactcggagctg
ctcgcggaagtctatctcgcgatgacgcgcggccaggaaagcctcgtcatcgacatgctc
ggcgaccagcaggcgtcgggctcggtttccacgtcgcgcatcgcgttcgacgatctcgac
ctgccggtgctcgctgccagcgcggaagaactcgcggcgcacgaagccgtgctgaccggc
ctcgacaaggcggtcaagggcacgagcgtatggcgcacggaaccggccccggcagaaggc
gacgccgttcccgcataa
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