Caballeronia sp. NK8: NK8_20300
Help
Entry
NK8_20300 CDS
T09553
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cabk
Caballeronia sp. NK8
Pathway
cabk03420
Nucleotide excision repair
cabk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cabk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NK8_20300
03430 Mismatch repair
NK8_20300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cabk03400
]
NK8_20300
Enzymes [BR:
cabk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NK8_20300
DNA repair and recombination proteins [BR:
cabk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NK8_20300
MMR (mismatch excision repair)
Other MMR factors
NK8_20300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
HHH_5
AAA_12
ResIII
Motif
Other DBs
NCBI-ProteinID:
BCQ23879
LinkDB
All DBs
Position
1:complement(2128574..2130739)
Genome browser
AA seq
721 aa
AA seq
DB search
MCVTLFPPPSPHVLTLPDTADAAFASAAKQVADYLAKLNEAQRQAVEFGVDEPGRAGGPL
LVIAGAGSGKTNTLAHRVAHLLVKGADPHRILLLTFSRRAALEMTRRVTRIAMNALGTKS
AIAQGLTWSGTFHGVGARLLRDYADLVGLAPSFTINDREDSADLMNLVRHELGLSSKEKR
FPAKSTCFAIYSRVVNTGATLSHVLDQSYPWCREWEADLKRLFAAYVAAKQAQSVLDYDD
LLLYWSHLAAEPSVAADLASRFDHVLVDEYQDTNRLQASILLAMKPDGRGLTVVGDDAQS
IYSFRGATVRNILDFPGHFDPPAATVTLDRNYRSTQPILEASNAVIGLASERYTKNLWTD
KASAQKPRVVSVADEADQARYVVEKVLEARESGMRLKSQAVLFRAAHHSATLEIELTRRN
IPFVKFGGLKFLDSVHVKDVLSVLRWAENPRDRVAGFRVAQLLPGIGPAIAARLLDSVSA
PDAVASGAIASFAAPARASEDWPRFVGLMAKLCGRESGWPAEFEMIRRWYEPHLERNHED
AAIRIGDILQMESIASTYPTRERFLTELTLDPPDATSDESGVPLLDEDYLILSTIHSAKG
QEWRNVFVLNGVDGCIPSDLGTGSDEEIDEERRLLYVAMTRAKEDLHIVTPQRFYVHNQT
HLGDRHVWAQRTRFIPPHLMQNFEAAAWPPVIAPAAPTAAGLAAAAKAKIDIAARLKGMW
E
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
gtgtgcgtcactcttttcccgccgccatctcctcacgtgctcacgcttcccgacaccgcc
gacgccgccttcgcctccgccgcgaaacaggtggccgactatctcgcgaagctcaacgag
gcgcagcgtcaggccgtcgaattcggcgtcgatgaacccggccgcgcaggcgggccgctg
ctcgtcatcgcgggtgcggggtcgggcaagacgaacacgctcgcgcaccgcgtcgcgcat
ctgctcgtgaagggcgccgatccgcatcgcatcctgctgctcacgttttcgcgccgtgcg
gcgctcgaaatgacgcggcgtgtcacgcgcatcgcgatgaacgcgctcggcacgaaaagc
gccatcgcgcaggggctgacgtggtcgggcacgtttcacggcgtcggcgcgcggctgttg
cgcgattacgccgacctcgtcgggctcgcgccgtcgttcacgatcaacgaccgcgaggat
tccgccgatctcatgaacctcgtgcggcacgagctcggtttgtcgtcgaaggagaagcgc
tttccggccaagtcgacatgcttcgcgatctactcgcgcgtcgtcaatacgggcgcgacg
ctcagccacgtgctcgatcagtcgtatccgtggtgccgcgagtgggaagccgatctcaag
cgcctgttcgccgcctacgtggccgccaaacaggcgcaaagcgtgctcgattacgacgac
ctgctgctctactggtcgcatctcgcggcggagccgtcggtggcggcggatctcgcgagc
cgtttcgatcacgtgctcgtcgacgaatatcaggacaccaatcgcctgcaggcgtcgatc
ctgctcgcgatgaaaccggacgggcgcggcctcaccgtcgtcggcgacgatgcgcaatcc
atctactcgtttcgcggcgcgacggtgcgcaatatcctcgatttcccgggccatttcgat
ccgcccgccgcgaccgtcacgctcgatcgcaactatcgctcgacgcaaccgatcctggag
gcgtcgaacgccgtgatcgggctcgcgtccgagcgctacacgaagaatctctggaccgac
aaggcatcggcgcaaaagccgcgcgtcgtgtccgtcgccgacgaagcggatcaggcgcgc
tatgtcgtcgagaaagtgctggaggcgcgcgagtcgggcatgaggctcaagtcgcaggcg
gtgctgtttcgcgccgcgcatcacagcgcgacgctcgaaatcgaactcacgcggcgcaat
attccgttcgtgaagttcggcggtctcaagtttctcgattccgtccatgtgaaggacgtg
ctttcggtgctgcgctgggccgagaatccgcgcgatcgcgtggcgggctttcgcgtcgcg
caattgctgccgggcatcgggcccgcgatcgccgcccgcctgctcgatagcgtgagcgcg
ccggatgcggttgcctcgggcgcgatcgcttcgttcgccgcgcccgccagagccagcgag
gactggccgcgcttcgtcggcctgatggcgaagctctgcgggcgcgagtcgggctggcct
gccgagttcgaaatgatccgccgctggtacgagccgcacctcgaacgcaatcacgaggac
gcggcgatccgcatcggcgatattttgcagatggagagcatcgcgtccacgtatccgacg
cgcgagcgctttctcaccgaactcacgctcgatccgcccgacgccaccagcgacgaatcc
ggcgtgccgctgctcgatgaggactatctgatcctctcgacgatccattcggcgaagggc
caggaatggcgcaacgtgttcgtgctgaacggcgtggacggttgcatcccgtccgatctc
ggcaccggcagcgacgaggaaatcgacgaggagcggcgtcttttatacgtcgcgatgacg
cgcgcgaaggaagatctgcacatcgtcacgccgcagcgtttctacgtgcacaaccagacg
catctgggcgaccgccacgtgtgggcgcagcgcacgcgcttcatcccgccgcatctcatg
cagaacttcgaagcggcggcgtggccgccggtgatcgcgcccgccgcaccgacggcggcg
ggactggcggcggccgcgaaagcgaaaatcgatatcgcggcgcgcctgaagggaatgtgg
gagtag
DBGET
integrated database retrieval system
