Caballeronia sp. NK8: NK8_20790
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Entry
NK8_20790 CDS
T09553
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
cabk
Caballeronia sp. NK8
Brite
KEGG Orthology (KO) [BR:
cabk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cabk03032
]
NK8_20790
03036 Chromosome and associated proteins [BR:
cabk03036
]
NK8_20790
03400 DNA repair and recombination proteins [BR:
cabk03400
]
NK8_20790
DNA replication proteins [BR:
cabk03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NK8_20790
Chromosome and associated proteins [BR:
cabk03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
NK8_20790
DNA repair and recombination proteins [BR:
cabk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
NK8_20790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
BCQ23928
LinkDB
All DBs
Position
1:complement(2175544..2175873)
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AA seq
109 aa
AA seq
DB search
MTKSELVAQLASRFPQLVLKDADFAVKTMLDAMSEALANGHRIEIRGFGSFGLNRRPSRV
GRNPKSGEKVLVPEKFVPHFKPGKELRERVDGRAGEPLKMSNDDDADDL
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatcggaattggtcgcccagttggcgtcgcgatttccgcaacttgtcctcaag
gatgcggatttcgcggtgaagacgatgctcgatgcgatgtcggaggctttggccaacggt
caccgcatcgagattcgcggcttcggcagcttcgggctcaaccgtcgtccgtcgcgcgtc
gggcgcaatcccaagtcgggtgagaaggtgctggtaccggagaaattcgtgccgcacttc
aagccgggcaaggaattgcgcgaacgcgtcgatggccgtgcgggagagccgctgaagatg
tcgaatgacgatgatgcggacgatctctga
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