Caballeronia sp. NK8: NK8_21950
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Entry
NK8_21950 CDS
T09553
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
cabk
Caballeronia sp. NK8
Pathway
cabk00521
Streptomycin biosynthesis
cabk00523
Polyketide sugar unit biosynthesis
cabk00541
Biosynthesis of various nucleotide sugars
cabk01100
Metabolic pathways
cabk01110
Biosynthesis of secondary metabolites
cabk01250
Biosynthesis of nucleotide sugars
Module
cabk_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
cabk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NK8_21950 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NK8_21950 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NK8_21950 (rfbC)
Enzymes [BR:
cabk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
NK8_21950 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
BCQ24043
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Position
1:complement(2320983..2321534)
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AA seq
183 aa
AA seq
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MAIQVTATALPEVKIIEPKVFGDARGFFYESFNAREFAEYVEAGVEFVQDNHSRSAKGVL
RGLHYQIQHAQGKLVRVVEGEVFDVAVDIRRSSPNFGKWVGVNLSAENNRQLWVPPGFAH
GFVVLSETAQFLYKTTDYWYQAHERSIVWNDQEIGIEWPIDFEPMLAAKDAAGKRLSEAE
CFE
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atggccatccaggtaaccgctaccgctctgcccgaagtcaagattattgagccgaaggtg
ttcggcgatgcgcgtggattcttctatgagagcttcaacgctcgcgaattcgcggagtat
gtcgaggcgggcgtcgaattcgtgcaggacaatcattcgcgctcggctaagggcgtgctg
cgtgggctgcattatcagatccagcacgcgcagggcaaactggtgcgcgtggtcgaaggc
gaagtgttcgatgtcgccgtggatatccgcaggagctcgccgaacttcggaaagtgggtg
ggcgtgaatctgtcggcggagaataatcggcaactgtgggtgccgccggggttcgcgcac
gggttcgtcgtgttgtcggagacggcgcagtttctctataagaccacggactactggtat
caggcgcacgagcgcagcatcgtctggaacgaccaggagattggcatcgagtggccgatc
gacttcgagccgatgctcgcggcgaaggatgcggcgggcaagcgtttgtcagaagcagag
tgtttcgagtga
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