Caballeronia sp. NK8: NK8_22440
Help
Entry
NK8_22440 CDS
T09553
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
cabk
Caballeronia sp. NK8
Pathway
cabk00541
Biosynthesis of various nucleotide sugars
cabk01100
Metabolic pathways
cabk01250
Biosynthesis of nucleotide sugars
Module
cabk_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
cabk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NK8_22440 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cabk01005
]
NK8_22440 (kdsB)
Enzymes [BR:
cabk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
NK8_22440 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
cabk01005
]
Lipid A
NK8_22440 (kdsB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
Motif
Other DBs
NCBI-ProteinID:
BCQ24092
LinkDB
All DBs
Position
1:2370161..2370952
Genome browser
AA seq
263 aa
AA seq
DB search
MSVPFIAVIPARLASTRLPNKPLADIGGKPMVVRVAERARESGASQVLVATDSDRVVEAA
RDHGIEVMLTRSDHPTGTDRLAEVATRLNWADDAIVVNVQGDEPLIDPQLVRDVADHLAT
HPECSIATAAHPIHDPADVFNPNVVKVVLDAKSVALYFSRAPIPWSRDLWQPHWPDVAAL
GQLPAVPENVLRHIGLYAYRAKFLRDFPTLAQAPIEAAEALEQLRALWHGERIAVRVTHD
APPPGVDTLADLERVQALFPKAD
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtaccgttcatcgcggtcattcccgcgcgcctcgcttccacgcgcctgccgaac
aagccgctcgccgatatcggcggcaagccgatggtcgtgcgcgtcgccgagcgcgcgcgc
gagtccggcgcgagccaggtgctcgtcgcgaccgattccgaccgcgtggtcgaggccgcg
cgcgatcacggcatcgaagtgatgctgacgcgctcggatcatcccaccggcaccgaccgc
ctcgccgaagtggccacgcgtctgaactgggccgacgacgcgatcgtcgtcaacgtgcag
ggcgacgagccgctcatcgatccgcaactcgtgcgcgatgtcgccgatcacctcgcgacg
catcccgagtgctcgatcgccacggccgcgcatccgatccacgatccggccgacgtcttc
aatccgaacgtggtgaaggtcgtgctcgatgcgaaaagcgtcgcgctctacttctcgcgc
gcgccgattccctggtcgcgcgatctctggcagccgcactggccggacgtcgccgcgctc
gggcaattgcccgccgtgccggagaacgtgctgcgtcacatcgggctctatgcctatcgc
gcgaagttcctgcgcgacttcccgacgctcgcgcaagcgccgatcgaggccgccgaagcg
ctggagcaactgcgcgcgctgtggcacggcgagcgcatcgcggtgcgcgtgacgcacgat
gcgccgccgcccggcgtcgacactctcgccgatctcgagcgcgtgcaggcgctcttcccc
aaagcggactga
DBGET
integrated database retrieval system
