Caballeronia sp. NK8: NK8_22880
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Entry
NK8_22880 CDS
T09553
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cabk
Caballeronia sp. NK8
Pathway
cabk00260
Glycine, serine and threonine metabolism
cabk00460
Cyanoamino acid metabolism
cabk00630
Glyoxylate and dicarboxylate metabolism
cabk00670
One carbon pool by folate
cabk00680
Methane metabolism
cabk01100
Metabolic pathways
cabk01110
Biosynthesis of secondary metabolites
cabk01120
Microbial metabolism in diverse environments
cabk01200
Carbon metabolism
cabk01230
Biosynthesis of amino acids
cabk01240
Biosynthesis of cofactors
cabk04981
Folate transport and metabolism
Module
cabk_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
cabk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NK8_22880
09102 Energy metabolism
00680 Methane metabolism
NK8_22880
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NK8_22880
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NK8_22880
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NK8_22880
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NK8_22880
Enzymes [BR:
cabk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NK8_22880
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Met_gamma_lyase
Motif
Other DBs
NCBI-ProteinID:
BCQ24136
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Position
1:complement(2406452..2407699)
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AA seq
415 aa
AA seq
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MFDRAESTLANVDPELLKAIEQENRRQEDHIELIASENYTSPAVMAAQGSQLTNKYAEGY
PGKRYYGGCEYVDIVEQLAIDRVKQLFGAESANVQPNSGSQANQGVFFAVLKPGDTIMGM
SLAEGGHLTHGSPVNMSGKWFNVVSYGLNEAEDIDYEKTEALAKEHKPKLIVAGASAFAL
RIDFERLSKIAKSVGAYFMVDMAHYAGLVAAGLYPNPVPHADFVTTTTHKSLRGPRGGVI
LMKSEFEKPVNSAIFPGIQGGPLMHVIAAKAVAFKEALSPDFKTYQQGVIDNARVLAETL
VKRGLRIVSGRTESHVMLVDLRAKKITGKAAEAALGAAHITVNKNAIPNDPEKPFVTSGV
RLGSPAMTTRGFGTKEAEIVGNLIADVLDNPEDQATIERVRAQVADLTKRFPVYR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacagagccgaaagtaccctcgccaacgtcgatcccgaattgctcaaggcgatc
gagcaggaaaaccgccgccaggaagatcacatcgagctgatcgcgtcggaaaactacacg
agcccggccgtgatggccgcgcaaggctcgcaactcaccaacaaatacgccgaaggctat
cccggcaagcgctactacggtggttgcgagtatgtcgacatcgtcgagcaactcgcgatc
gaccgcgtaaagcaactgtttggcgccgaatccgcgaacgtgcagccgaactccggctcg
caggcgaatcagggcgtgttcttcgcggtgctcaagccgggcgacacgatcatgggcatg
agcctcgccgaaggcggtcatttgacgcacggctcgccggtcaacatgtcgggcaagtgg
ttcaacgtcgtgagctacggcctgaacgaagccgaagacatcgactacgaaaagaccgaa
gcgctcgccaaggaacacaagccgaagctgatcgtcgcgggcgcgtcggcgttcgcgctg
cgcatcgacttcgaacgtctctcgaagatcgcgaagagcgtcggcgcttacttcatggtc
gacatggcgcattacgccggtctcgtcgcggccgggctgtacccgaatccggtgccgcac
gccgatttcgtcaccacgacgacgcacaagagcctgcgcggcccgcgcggcggcgtgatc
ctgatgaagtccgagttcgagaagccggtcaattcggcgatcttcccgggcattcagggc
ggaccgctcatgcacgtgatcgcggcgaaggctgtcgcgttcaaggaagcgctgtcgccg
gacttcaagacgtatcagcaaggcgtgatcgacaacgcgcgcgtgctcgccgaaacgctg
gtgaagcgcggtttgcgcatcgtgtcgggccgcacggaaagtcacgtgatgctggtcgat
ctgcgcgcgaagaagatcacgggcaaggctgcggaagccgcgctcggcgcagcgcacatc
accgtcaacaaaaacgcgatcccgaacgatcccgaaaagccgttcgtcacgagcggcgtg
cgtctcggctcgcccgcgatgaccacgcgcggcttcggcacgaaggaagcggagatcgtc
ggcaacctgatcgccgacgtgctcgacaatccggaagaccaggcgaccatcgagcgcgtg
cgcgcgcaagtggccgatctgaccaagcgtttcccggtctatcgttaa
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