Caballeronia sp. NK8: NK8_23190
Help
Entry
NK8_23190 CDS
T09553
Name
(GenBank) SIS domain-containing protein
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
cabk
Caballeronia sp. NK8
Brite
KEGG Orthology (KO) [BR:
cabk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cabk03000
]
NK8_23190
Transcription factors [BR:
cabk03000
]
Prokaryotic type
Helix-turn-helix
Other families
NK8_23190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS
HTH_6
SIS_2
HTH_3
HTH_Crp_2
HTH_31
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
BCQ24166
LinkDB
All DBs
Position
1:2441269..2442108
Genome browser
AA seq
279 aa
AA seq
DB search
MLLSQVEAKREQLRPSERKLADYVLEAPREVLDLSMTDFAARAGVSQPTIARFCQALGFS
GFREFKIRLAQNIAADVPTVYRDVRADEPPAGVAAKVLDRTIGALIAVRNTLSSDSVAAA
IAILAEARRIEFYGAGGSGIAALDMQHKFFRLGVPSVAYSDPHTYTTSAALLGAGDVVVA
ISNTGRTRDILDACRSALNGGAKVIAITHGHSPLARLATVGLFANVDEDTDIFSPMTSRV
SHLAIGDILAVGLALARGPALADKLAEAKDVLEGRRVGA
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgtctcaagtcgaagcgaagcgcgagcaactgcggccgtccgagcgcaagctg
gccgactacgtgctcgaagcgccgcgcgaggtgctcgacctgtcgatgaccgatttcgcg
gcgcgcgccggcgtcagtcagccgaccatcgcgcggttttgccaggcgctcggcttttcg
ggcttccgggaattcaagattcgcctcgctcagaacatagcagcggacgttcccaccgtt
taccgcgacgtgcgcgcggacgagccgcccgcgggcgtcgcggccaaggtgctcgaccgg
accatcggcgcgctgatcgccgtgcgcaatacgctctcgtcggacagcgtcgcggcggcc
atcgcgatcctggccgaggcgcgccgcatcgagttctacggcgcgggcggatcgggcatc
gccgcgctcgacatgcagcacaaattttttcgattgggcgtgccgtctgtcgcatactcc
gatccgcatacgtacaccacttctgccgcgctactcggcgcgggcgacgtcgtcgttgcg
atctccaataccgggcgcacccgggacattctcgacgcgtgcagatcggcgttgaatggc
ggcgccaaggtcatcgcgatcacgcacggccactcgccgctcgcgcgcttggcgactgtc
ggattgttcgcaaatgtcgatgaagacaccgacattttttcgccgatgacatcgcgcgtg
tcacatctcgcgatcggcgacattctggcggttggtctggcgctggcgcgcgggccggcg
ctcgcggacaagctcgctgaggcgaaggacgtgctggaaggacggcgggtgggagcgtaa
DBGET
integrated database retrieval system
