Caballeronia sp. NK8: NK8_23460
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Entry
NK8_23460 CDS
T09553
Name
(GenBank) SWIM zinc finger family protein
Organism
cabk
Caballeronia sp. NK8
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWIM
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
BCQ24193
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All DBs
Position
1:2469333..2472647
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AA seq
1104 aa
AA seq
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MTKPDSQTADPATYTRDQVARWMGPKTIGKALGYVHAVADIDLVKHMMYAQVPGTQPAPY
MVEITFQSGRPHGYCSCPVGYDCKHVAATLLAWLERKEAAERSGVSMAVERWLSGFRAKV
EATRQAQAKAARSATGAVYQIVYVLMPSLRGHSGFELVTLKARLNVDGAIRATESWYPNY
AAWKSPPKFVSTEDDAIIRALRTERGYSGDGYAPFGKRGAVVWQMMLATGRLYFEPNANA
LQLKQPLREGARRRGNVEWIPHHDDMIFAALETEPEGGVVLPTEPPWYFDGVRNETGPVD
SPVPDELLADYLAMPVLTLEEAAIVRAALAEFASELPAPPADGDAGTRTIDAAPVPVLTL
ATLLLDAPRRLNAPPVELDIARFDFDYGGITIPANGLETLVRLADGERVRIARRQDAEDA
CWNRLIEAGLKSITGVRGHHDDSQYAGAFVLPSQDAWPAFVAEQVPALRAAGWRVIIEPN
SRFDVVEIEEIEATARAAENNWFDLELGIMVETERVRLEPLLAELFARDRRWLNGAIDLI
DDAHAVEFRTLAGRRFMVRAARIKPLVHALIDLFDRADPQAETPLRLSALEAGRLAEADE
RLRWQFDGDASVVGLAQRLRKAAGPRRIAVPRGLKAKLRDYQREGVDWMQFLREHDLAGV
LADDMGLGKTVQTLAHILVEKEAGRLTRPALIVVPTTLVNNWQEEARRFAPRLKVLDLHG
PQRHERFALIPEHELIVTTYPLVWRDHEALAQHDYHLLILDEAQYVKNASSKAAGVIRTL
RARHRLCLTGTPLENHLGELWSQFDFLLPGFLGTQKDFAARWRKPIEKYNDSTRRDLLAR
RIRPFLLRRRKDDVATELPPKTMIVRSVELEGAQRDLYETVRAAMQKKVRDAIAQQGFAR
SHILMLDALLKLRQVCCDPSLVKLPGAKKTSDSAKLALLLDMLPNLIEEGRRVLVFSQFT
GMLAIISAALDAAGLGYVTLTGETADRTTPVQRFQAGEAPIFLISLKAGGVGLNLTAADT
VIHYDPWWNPAAENQATDRAHRIGQDKPVFVYKLVATGSIEEKILSMQERKAALAAGILS
EDSRAVEKFSAEDIDALFAPIPDA
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaccagatagccagacggccgatccggccacatacaccagagaccaggtggcc
cgctggatgggcccgaagaccatcggcaaggcgctcggctatgttcatgccgtcgcggat
atcgacttggtgaagcacatgatgtacgcgcaggtaccggggacgcaaccggcgccgtac
atggtcgagatcacattccagagcggccggccgcacggctactgctcctgcccggtcggg
tatgactgcaagcatgtcgcggcaacgctgctcgcctggctggagcgaaaggaagcggct
gagcgatccggcgtgagcatggccgtcgagcggtggctgtcgggctttcgcgccaaggtc
gaggcgacgcggcaggcgcaggcgaaagcggcccgatccgctaccggcgcggtgtatcag
atcgtctacgtgctcatgccgtccctgcgcggtcactcgggtttcgagctggtgaccctc
aaggcgcggctcaacgtcgatggcgcgatccgcgcgaccgaaagctggtacccgaactac
gccgcctggaaaagcccgcctaaattcgtgtccaccgaggacgacgcgatcatccgcgcg
ctcagaaccgagcgcggctattcgggcgacggttacgcaccattcggcaagcgcggcgcg
gtggtgtggcagatgatgctagcgacgggccgcctctacttcgagccgaacgcgaatgcc
ctgcagctgaaacagcctttgcgcgaaggcgcgcgccgccgcggcaatgtcgaatggatt
ccgcaccacgacgacatgatcttcgcggcgctcgaaaccgaaccggaaggcggcgtcgtg
ctgccgaccgaaccaccgtggtacttcgatggcgtcaggaacgaaaccggccccgtcgat
tcacccgtgcccgacgaactcctcgccgactacctggcgatgccggtgctgacgctcgag
gaagcggccatcgtgcgcgcggcgctcgccgaattcgcgtccgaactgcccgcgccgccc
gccgacggcgacgcggggacccgcacgatcgacgccgcgccagtccccgtgctcacgctc
gccacgctcctgctcgacgcgcctcgcaggctgaacgcgccgccggtggaactcgatatc
gcccggttcgatttcgactacggcggcatcacgattccggcgaacggtctcgagacgctc
gtgcggctcgcggacggcgaacgcgtccgtattgcgcgccggcaagatgccgaagacgcg
tgctggaatcgtctgatcgaagccggactgaagtccattaccggcgtgcggggccatcac
gacgactcccagtatgccggcgccttcgtcttgccctcgcaggatgcgtggccagcgttc
gtcgccgaacaggtgcccgcgctgcgtgcagccggctggcgcgtgatcatcgagccgaac
tcgcgtttcgatgtcgtcgagatcgaagaaatcgaggcgaccgcgcgtgccgccgagaac
aactggttcgatctcgaactgggcatcatggtcgagacggagcgcgtgcgcctggaaccg
ctgctcgccgaactcttcgcgcgcgaccgccgctggctcaacggcgcgatcgatctgatc
gacgacgcccacgccgtcgaattccgtactctggcgggcaggcgcttcatggtgcgcgcc
gcgcggatcaaaccgctcgtgcatgcgctgatcgacctgttcgaccgcgccgatcctcaa
gcggaaacaccgttgcgactgtcggcgctcgaagccggccgcctcgccgaagccgatgaa
cgattgcgctggcaattcgacggcgacgcgtcggtggtcggactcgcgcagcggctgcgc
aaagccgccggaccgcgccggatcgccgtgccgcgcggcctgaaagcgaagttgcgcgat
taccagcgcgaaggcgtcgactggatgcagttcctgcgcgaacacgatctcgccggcgtg
ctcgccgacgacatgggcctcggcaagaccgtgcagacgctcgcgcacatcctcgtcgaa
aaggaagccggccgtctgacgcgcccggcactgatcgtcgtgccgaccacgctcgtcaac
aactggcaggaagaagcgcgccgtttcgcgccacggctcaaagtgctggatctgcatggg
ccgcagcgccacgaacgcttcgcgctcatcccggagcacgaactcatcgtcacgacgtat
ccgctcgtctggcgcgatcacgaagcgcttgcgcaacacgactatcacctgctgatactc
gacgaggcgcagtacgtgaagaacgcctcgagcaaggcggcgggcgtcatccgcacgttg
cgcgcgcggcatcgcctgtgcctgaccggcacgccgctcgagaatcatctgggcgaactc
tggtcgcagttcgatttcctgctgcccggctttctgggcacgcaaaaagacttcgcggcc
cgctggcgcaaaccgatcgaaaagtacaacgattcgacgcgccgtgacctgctcgcgcgc
cggattcgccccttcctgctccgtcgccgaaaggacgatgtcgcgaccgaactgccgccg
aagaccatgatcgtgcgcagcgtcgagctggaaggcgcgcagcgcgatctctatgagacc
gtgcgcgccgcgatgcagaagaaggtgcgcgatgcgatcgcgcagcaaggtttcgcacgc
agccacatcctgatgctcgacgcgctgctgaagctgcggcaggtgtgctgcgatccgtcg
ctcgtcaaactgccgggcgcgaaaaaaacgtcggattcggccaagctcgcgctgttgctc
gacatgctgccgaacctgatcgaggaaggccggcgcgtgctggtgttctcgcaattcacg
ggcatgctcgcgatcatctccgccgcgctcgacgcggccggtctcggctacgtcacgctg
acgggcgaaaccgccgatcgcacgacgcccgtgcagcgctttcaggccggcgaagcgccg
atcttcctgatcagcctgaaagcgggcggcgtcggcctgaacctgaccgccgccgatacc
gtcattcattacgacccgtggtggaaccccgccgccgagaatcaggcgacagaccgggcg
caccgcatcgggcaggacaagccggtgttcgtgtacaagctcgtggcgacgggcagcatc
gaggaaaagattctgtcgatgcaggagcgcaaggcagcgctcgccgcggggattctgtcc
gaagattcgcgcgcggtggagaagttctccgccgaggacatcgacgcgctgttcgcgccg
attcccgatgcctga
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