| Entry |
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| Name |
(GenBank) RNB domain-containing ribonuclease
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| KO |
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| Organism |
cabk Caballeronia sp. NK8
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| Brite |
KEGG Orthology (KO) [BR:cabk00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:cabk03016]
NK8_23600
Enzymes [BR:cabk01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
NK8_23600
Transfer RNA biogenesis [BR:cabk03016]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NK8_23600
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1:complement(2486138..2488192)
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| AA seq |
684 aa
MNVFFEESGSFKAGSVLSKQGDAFQVELPGGRRAKVRAKDVLIEFDKPAAGDLMQEADAI
AQDIDLDFLWECAPEDEFPFAALGADYFGDKFGPAERAALVLRMHGAPVYFRRKGRGQYQ
RAPQEQLQMALAGLERKRQQALVQQGYEEELKAGKLPDALKDKALGLLTKPDKNSIEYKA
LEAAAAARGISQARLMLECGGIASPRALHEARFLSEHFPHGIGFPSVQPGPLPEDLPEAH
VEAFSIDDVTTTEIDDAFSVEHLSDGRVRVGIHIAAPALGITRGDAIDAIARGRLSTVYM
PGDKITMLPDNVVDVFTLGEGGLRPALSLYIIVNRETQDIVATETRAERVFVKSNLRHNH
LDEFVTEESLAAGTGDYPHKADIAVLWPLAQALFEKRQQARATYGLKREVQRNNDFNFYV
EGEHITITPRRRGSPLDLIVAELAILANSSWGAFLNDHGVPGIYRSQRGFGGPGPKRTRM
QTTPAPHEGLGVAQYAWSTSPLRRYVDLVNQWQLIACVQHGVTAKLAAPFKPKDADLFAV
VQGFDDTYTAYADHQRRMEYFWCLRWLKQENRKHVPASVIKDDLVRLEEIPLILHVPGLG
VHARGTRVMLEVVSIDELTVEASCRLLHVIDAPAASAPVEEEEAEEEIIETTDLSAESEA
EAQAEAPAEQPQPETPDNAQEPTP |
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| NT seq |
2055 nt +upstreamnt +downstreamnt
gtgaacgttttcttcgaggaatcgggtagtttcaaggccggatcggtgctgtccaaacag
ggcgacgcgttccaggtcgagttgccgggcgggcggcgcgcgaaggtgcgcgccaaagac
gtgctgatcgaattcgacaaacccgccgccggcgatctgatgcaggaagccgacgccatc
gcgcaggacatcgatctcgactttctgtgggagtgcgcgcccgaagacgaattcccgttc
gcggcgctcggcgcggactatttcggcgacaagttcggtcccgccgaacgcgcggcgctc
gtcctgcgcatgcacggcgcgccggtatatttccggcgcaagggacgcggccagtatcag
cgcgcgccgcaggaacagttgcagatggcgctggccgggctggagcgcaagcgtcagcag
gcgctcgtgcagcagggctacgaagaggaactgaaggcgggcaaactgcccgatgcgctg
aaggacaaggcgctcggcctgctcaccaaaccggacaagaactccatcgagtacaaggcg
ctcgaagcggcggcggccgcgcgcggcatctcgcaggcgcgtctgatgctggagtgcggc
ggtatcgcatcgccgcgcgcgctgcacgaagcgcgctttctgtcggagcattttccgcac
ggcatcggctttccgtcggtgcagccggggccgctgcccgaggatctgcccgaagcgcat
gtcgaagccttctccatcgacgacgtcaccacgacagaaatcgacgacgcgttttccgtc
gagcatctttccgatggccgcgtgcgcgtgggcatccacatcgcggcgccggcgctcggc
atcacacgcggcgacgcgatcgacgcaatcgcgcgcgggcgtctgtcgaccgtctacatg
cccggcgacaagatcacgatgctgcccgacaacgtcgtcgatgtgttcacgctcggcgaa
ggcggactgcgcccggcgctgtcgctgtacatcatcgtgaatcgcgagacgcaggatatc
gtcgcgacggaaacgcgcgccgagcgcgtgttcgtgaagagcaatctgcgccacaaccat
ctcgacgagttcgtcaccgaggaaagcctcgcggcgggcacgggcgactatccgcacaag
gcggacatcgcggtgctgtggccgctcgcgcaggcgctcttcgagaagcggcagcaggcg
cgcgccacctatggcctcaagcgcgaagtgcagcgcaacaacgacttcaacttctatgtc
gagggcgagcacatcacgatcacgccgcgccgtcgcggctcgccgctcgatctgatcgtc
gcggagctggcgattctcgcgaattcgtcgtggggcgcgttcctgaacgatcacggcgtg
ccgggcatctatcgctcgcagcgcggtttcggcgggccgggcccgaagcgcacgcgcatg
cagacgacgcccgcgccgcacgaaggtctgggtgtcgcgcaatacgcgtggagcacgtcg
ccgctgcgccgttacgttgatctcgtcaatcaatggcaactgatcgcgtgcgtgcagcac
ggcgtgacggcgaagctcgccgcgccgttcaagccgaaggacgcggaccttttcgccgtc
gtgcagggcttcgacgatacctacactgcgtatgccgatcaccagcgccgcatggagtat
ttctggtgcctgcgctggctgaagcaggagaacaggaaacacgttccggcgtcggtcatc
aaggacgatctcgtccggctcgaagaaattccgctgattctgcacgtgccgggtctcggc
gtgcatgcgcgcggcacgcgcgtgatgctggaagtcgtatcgatcgatgagctgaccgtc
gaagcgtcgtgccgtctgctgcacgtcatcgatgcgcccgccgcgagcgcgccggtcgag
gaagaagaggcggaagaagagatcatcgagacgaccgatctttccgccgaaagcgaagcc
gaagcgcaggcggaagcgccggcggagcagccacaaccggaaacgccggacaacgcgcag
gaaccgacgccatga |
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