Caballeronia sp. NK8: NK8_24470
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Entry
NK8_24470 CDS
T09553
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cabk
Caballeronia sp. NK8
Pathway
cabk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cabk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NK8_24470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cabk03400
]
NK8_24470
Enzymes [BR:
cabk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NK8_24470
DNA repair and recombination proteins [BR:
cabk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NK8_24470
Prokaryotic type
NK8_24470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BCQ24288
LinkDB
All DBs
Position
1:2580568..2581347
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AA seq
259 aa
AA seq
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MNQQPSLFADNEPAAASDVTTLESQFDALPADWRRHLKPFIDGKHYAALCAFVDAERAAG
KTVYPADVFRALRLTSPGDVKVVILGQDPYHGEDKGAPQAHGLAFSVPAPVRPPPSLRNI
FKEIHASLGFPAPAHGCLDSWAKQGVLLLNTSLTVERDKAGSHAKRGWEQCTDTLIHEMA
QRHDGLVFMLWGAHAQAKRGLIEGTGKSHCVLEAVHPSPLSAYRGFFGCGHFALANDYLT
KHGREPIDWRLPAEPELLA
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagcagccttccctcttcgcggataacgaacccgcggctgcgtcggatgtcacg
acgctcgaaagccagttcgacgcgctgcccgccgactggcgccgccatctgaagccgttc
atcgacggcaagcactatgcggcgctatgcgcgttcgtcgatgccgagcgcgccgccgga
aagacggtctatcccgccgatgtctttcgcgcgctgcgtctcacgagtcccggcgacgtg
aaagtcgtgattctcgggcaagacccgtatcacggcgaagacaagggcgcgccgcaagcg
catggcctcgcgttctcggtgcccgcgccggtgcggccgccgccgtcgttgcgcaacatc
ttcaaggaaatccacgcgagcctcggttttccggcgcccgcgcacggatgcctcgattcg
tgggcgaaacagggcgtgttgctgctcaatacgtcgctgaccgtcgagcgcgacaaggcc
ggcagccacgcgaagcgcggctgggagcaatgcaccgacacgctgatccacgaaatggcg
cagcgtcacgacggcctcgtgttcatgctgtggggcgcgcatgctcaggcgaagcgcggc
ttgatcgaaggcacggggaaatcgcattgcgtgctggaagcggtgcatccctcgccgttg
tcggcgtatcgcggatttttcggttgcggacatttcgcgctcgccaacgactatctgacg
aagcacggtcgcgagccgatcgactggcgcttgcccgccgagccggaattgctcgcctga
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