| Entry |
|
|---|
| Symbol |
recQ
|
|---|
| Name |
(GenBank) DNA helicase RecQ
|
|---|
| KO |
|
|---|
| Organism |
cabk Caballeronia sp. NK8
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:cabk00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NK8_25860 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:cabk03019]
NK8_25860 (recQ)
03400 DNA repair and recombination proteins [BR:cabk03400]
NK8_25860 (recQ)
Enzymes [BR:cabk01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NK8_25860 (recQ)
Messenger RNA biogenesis [BR:cabk03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NK8_25860 (recQ)
DNA repair and recombination proteins [BR:cabk03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NK8_25860 (recQ)
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
1:complement(2708604..2710451)
|
|---|
| AA seq |
615 aa
MARSLEILNEIFGYPAFRGQQAEIVEHVANGGDSLVLMPTGGGKSLCYQIPSLVRSEAGL
GAGIVVSPLIALMQDQVAALTEVGVRAAYLNSTLSGAEAAATERALREGDIDLLYVAPER
LMTPRFLELLERARVGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPDVPRIALTATAD
AITRDEIVHRLALDDARIFVSSFDRPNIRYRIVEKDNARSQLLDFIRAEHTNKDGTTDAG
VVYCLSRRKVEETADWLKGQGVRALPYHAGMEFETRQKHQEMFQREEGIVMCATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGMPANAWMAYGLGDVVQQRKMIDESEADD
AHKRVQSGKLDALLGLCEAASCRRVRLLAYFGETSKPCGNCDTCLEPPASFDATREAQMA
LSCVYRAQKASGFRFGAGHLIDILRGTRSEKVLQRGHEKISTFGVGAALSEAEWRAVFRQ
LVAFGYLAVDHDGFGALVLTDASKPVLKGEESVTLRKYVKPTRARQSSSRTGERADPTAG
MSAREKARWDRLRTWRAETAKSDGVPAYVIFHDATLAEIARSDPDTVDDLRHIPGIGVRK
LERFGDELLDVVGSD |
|---|
| NT seq |
1848 nt +upstreamnt +downstreamnt
atggcccggtcgctcgaaatactcaacgaaatcttcggctatcccgcatttcgcggacaa
caggcggagatcgtcgagcatgtcgcgaacggcggcgattcgctcgtgctgatgcccact
ggcggcggcaagtcgctgtgctatcagattccgtcgctcgtgcgcagcgaggccgggctt
ggcgccggcatcgtggtgtcgccgcttatcgccttgatgcaggaccaggtcgccgcgctg
acggaagtcggcgtgcgcgccgcgtatctgaattccacattgtcgggcgccgaggctgcg
gccaccgaacgcgcgctgcgcgagggcgatatcgacttgctctacgtcgcgccggaacgc
ctgatgacgccgcgctttctcgaactgctcgaacgcgcgcgcgtcggcctgttcgcgatc
gatgaagcgcactgcgtgtcgcagtggggccacgatttccgccctgaatatatccagctt
tccgtgctgcacgagcggtttcccgatgtgccgcgcatcgcgctcaccgcgaccgccgac
gcgatcacgcgcgatgaaatcgtccaccggctcgcgctggacgatgcgcgcattttcgtt
tccagcttcgatcggccgaatattcgttatcgaatcgtcgagaaggacaacgctcgctcg
cagctgctcgatttcatccgcgccgagcacacgaacaaggacggcacgaccgatgcgggc
gtcgtatattgcctgtcgcggcgaaaggtcgaggagaccgcggactggctgaaaggccag
ggcgttcgcgcgctgccgtaccacgctgggatggagttcgagacgcggcagaagcaccag
gagatgttccagcgcgaggaaggcatcgtcatgtgcgcgacgatcgcgttcggcatgggc
atcgataaaccggacgtgcgttttgtcgcgcatctggatttgccgaagagcgtcgaaggc
tactatcaggaaaccggtcgcgccggccgcgacggcatgccggcgaacgcgtggatggcg
tacggattgggcgatgtcgtgcaacagcgcaagatgatcgacgagtccgaagccgacgac
gcgcacaagcgcgtgcagagcggcaagctcgacgcgctgctggggttgtgcgaagcggcg
tcgtgtcgtcgtgtacgtttgctcgcgtacttcggcgagacgagtaagccgtgcggcaac
tgcgatacgtgtctggagccgcctgcgtccttcgatgccacgcgcgaggctcagatggcg
ctttcatgcgtttatcgcgcgcagaaggcgagcggctttcgtttcggcgcggggcatctc
atcgatattctgcgtgggacgcgcagtgagaaagtcctgcagcgcggacacgagaagatt
tcgaccttcggcgtcggcgcggcgctctccgaggcagagtggcgtgccgtgttccggcaa
ctggtcgcgttcggctatctcgccgtcgatcacgacggtttcggcgcgctcgtgctcacc
gacgcgagcaagcccgtcctcaagggcgaagagagcgtcacgctgcgcaagtatgtcaag
ccgactcgggcccgccagtcttccagccgcacgggcgagcgcgcggatccgaccgctggc
atgtcggcacgcgagaaggctcgttgggaccgtctgcgtacctggcgcgcggaaaccgca
aagagcgacggcgtgccggcctacgtcatctttcacgacgccacgcttgccgaaatcgcc
cgcagcgatcccgatacggtcgacgatctgcgccatattccgggcatcggcgtgcgcaaa
ctggagcgcttcggcgacgaactgctcgatgtcgtcggctccgactga |
|---|
