Caballeronia sp. NK8: NK8_29810
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Entry
NK8_29810 CDS
T09553
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K17736
AraC family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
cabk
Caballeronia sp. NK8
Brite
KEGG Orthology (KO) [BR:
cabk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cabk03000
]
NK8_29810
Transcription factors [BR:
cabk03000
]
Prokaryotic type
Helix-turn-helix
AraC family
NK8_29810
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
DJ-1_PfpI
HTH_AraC
Zn_ribbon_LapB
HTH_11
Motif
Other DBs
NCBI-ProteinID:
BCQ24805
LinkDB
All DBs
Position
2:complement(66962..67939)
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AA seq
325 aa
AA seq
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MSTPHHFHFLLLPEFSSIGFMSAIEPLRVANRFAGDLYRWHILSVDGGPVAASNGITLNA
EGAFDQVSDARTVFVVSGFEPLSDYTRAIGDWLKRLDRAGATLGGIDTGSFILAEAGLLA
GRRATLHWEAAAAFTERYPAIETSQELFEIDTRRITCAGGTASIDLMLDLIAREHGASLA
AQVSEQFVLGRIRQRSDHQRLQIAARYGIHNRKLIQVIELMEQNMEEPLSPDALAESIGV
TRRQLERLFCASMKDTPTHFYLGLRLARARELLQQTDMSILAVCVACGFESPSHFSRTYR
VRFNTSPRQDRSALRGVAAAGLAAA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccccaccattttcacttcctgttgctgcccgaattctcgtcgatcggcttc
atgtccgcgatcgaacctttgcgagtcgccaatcgcttcgcgggcgatctgtatcgctgg
catatcctgtccgtcgacggcgggccggtcgccgcgagcaacggcatcacgctcaatgcc
gaaggcgcattcgatcaggtgagcgatgcgcgcaccgtgttcgtcgtgtcgggcttcgag
ccgctctccgactacacgcgcgcgatcggcgactggctgaagcgtctcgatcgcgcgggc
gcgacgctcggcggcatcgacacgggcagcttcatcctcgcggaagccggcctgctcgcg
ggcaggcgcgcgacgctgcattgggaagcggccgctgcgttcactgagcgttatccggcc
atcgagacgagtcaggaactcttcgagatcgacacgcgtcgcatcacgtgcgcgggcggc
acggcgtcgatcgatctgatgctcgacctgatcgcgcgcgagcatggcgcgagcctcgcg
gcgcaggtgtcggagcagttcgtgctggggcgcatcaggcagcgctcggatcatcaacgg
ctgcagatcgcggcgcgctacggcatccacaaccgcaagctgatccaggtgatcgagctg
atggagcagaacatggaagagccgctgtcgccggatgcgctcgccgaatcgatcggcgtg
acgcggcggcaactggagcggcttttctgcgcgtcgatgaaggacacgccgacgcatttc
tatcttgggcttcggctcgcgcgggcgcgcgagctgttgcagcagacggatatgtcgatc
cttgcggtatgcgttgcttgcgggttcgaatcgccgtcgcatttctcgcgcacgtatcgt
gtgcgcttcaacacgagtccgcggcaggatcgcagcgcattgcgtggcgtcgctgccgct
gggctcgcggcggcctag
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