KEGG   Caballeronia sp. NK8: NK8_30920
Entry
NK8_30920         CDS       T09553                                 
Name
(GenBank) DNA topoisomerase IB
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
cabk  Caballeronia sp. NK8
Brite
KEGG Orthology (KO) [BR:cabk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cabk03032]
    NK8_30920
   03400 DNA repair and recombination proteins [BR:cabk03400]
    NK8_30920
Enzymes [BR:cabk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     NK8_30920
DNA replication proteins [BR:cabk03032]
 Prokaryotic type
  DNA Topoisomerases
   NK8_30920
DNA repair and recombination proteins [BR:cabk03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      NK8_30920
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact
Other DBs
NCBI-ProteinID: BCQ24916
LinkDB
Position
2:202115..203380
AA seq 421 aa
MQGCPEDLPPGLRYMDDSRRGYTREWTDGAFAYFNTQSRRIDDEAEIRRINALAIPPAYT
DVWICPDARGHLQATGRDARGRKQYRYHPQWRETRDATKYERMLAFSGVLPKLRARVARD
LTLDGMPRNKVLATVVRLLDTTLIRVGSEEYARENRSYGLTTLRKRHLKVSAGMLRFRFR
GKSGIEHDVAVSDTRVARIVKRCMDLPGQDLFQYLDADGTRHSVSSSDINEYLHEITGAD
FTAKDYRTWAGSVFALAALRRLKWETVTEARKHVVGTIKEVAQLLRNTPAVCRKCYVHPA
VIDAFEAGELAETLPASRRHGLKTDEAALAIFLEKEAKRRTREAARKNRKGAAPSDTRIT
KLLTESSRKARAGALKASGKNPASQALDQVVRKPAKKAARPASKKLARTRTETAVAIGSG
A
NT seq 1266 nt   +upstreamnt  +downstreamnt
gtgcagggctgccccgaggatctgccgccgggcttgcgctacatggacgattcgcggcgc
ggctatacgcgcgaatggaccgacggcgcattcgcgtacttcaacacgcagagcaggcgc
atcgacgatgaagcggagattcgccgcatcaatgcgctcgctattccgcccgcttacacc
gatgtctggatctgccccgacgcgcgcggccatctccaggcgaccgggcgcgatgcgcgc
ggtcgcaagcaatatcgctatcacccgcaatggcgcgaaacccgcgatgccaccaagtac
gagcgcatgctcgcgttctccggtgtgctgccgaagttgcgcgcacgcgtcgcgcgcgat
ttgacgctcgacggcatgccgcgcaacaaggtgctcgcgaccgtcgtgcgcctgctcgac
acgacgctgatccgcgtcggcagcgaggagtacgcgcgcgagaatcgctcgtatgggctg
acgacgttgcgaaagcgtcatctgaaagtatcggcggggatgctgaggttcaggtttcgc
gggaagagcggtatcgagcacgatgtcgccgtgagcgatacgcgagtcgcccgcatcgtc
aagcgctgcatggatctgcccggtcaggatctcttccagtatctcgatgcggacggcacg
cgtcattcggtcagttcatcggacatcaacgaatatctgcacgagatcaccggcgcggat
ttcaccgcgaaggactatcggacgtgggccggcagcgtgttcgcgctcgcggcgctcaga
aggctcaaatgggagacggtgacggaggcgcgcaagcatgtcgtcggcacgattaaggaa
gttgcgcaattgctgcgcaacacgcctgccgtgtgccgcaagtgctacgtgcatcctgca
gtcatcgacgcattcgaggcgggcgaactggcggaaacgctgcccgcgtcgcgccgccac
ggattgaagaccgatgaagccgcgctcgcgatcttcctcgagaaggaagcgaagcgccgc
acccgcgaggcggcgcgcaagaaccgaaagggcgctgcgccgagcgacacgcgcatcacg
aagctgctcaccgaatcgagccgcaaggcgcgcgccggtgcgctcaaggcgagcggcaag
aatccggcgagccaggcgctggatcaggtcgtccgaaagccggcgaaaaaggccgcgcgg
ccggcgtcgaagaagctggcgcgcacgcgcaccgaaaccgcggtggcgatcggttcaggc
gcgtga

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