Caballeronia sp. NK8: NK8_42820
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Entry
NK8_42820 CDS
T09553
Name
(GenBank) LysR family transcriptional regulator
KO
K14057
LysR family transcriptional regulator, regulator of abg operon
Organism
cabk
Caballeronia sp. NK8
Brite
KEGG Orthology (KO) [BR:
cabk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cabk03000
]
NK8_42820
Transcription factors [BR:
cabk03000
]
Prokaryotic type
Helix-turn-helix
LysR family
NK8_42820
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Mga
DUF6319
MarR
MarR_2
Cro
HTH_24
Motif
Other DBs
NCBI-ProteinID:
BCQ26098
LinkDB
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Position
2:1474552..1475451
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AA seq
299 aa
AA seq
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MSMKYHQLRAFLTTAEQGSIRAAARSLHLSQAALTKAIKELEQDLGVPLVLRTARGVQLT
AFGQQLRVRAHLIVSEMRRAEDDIAQMKGAGAGSVSAAVTPTAALSILPQAYRAFRRQMP
NARVSFIEGFPGVAMPRLRDGSLDFVVAVVVPEHLAPEFDHIELYESRSAIVGRADHPLR
HCTSLAELSEAEWLLNPSPESSTQALLDSYAERGLMVPKRVIECPSFIIAHGLLRGSDAL
AALPSALLEHQWVGEGLAIFPIADPLPAVSVRVVTRRDSPLTPAATLLLECLQHAARSQ
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgaaataccaccagttgcgcgcgttcctgacgaccgccgagcaaggcagcatc
cgcgcggccgcgcgcagtctgcatctgtcgcaggcggcgctgacgaaggccatcaaggaa
ctggagcaggatctcggcgtgccgctcgtgctgcggaccgcgcgcggcgtgcaactgacc
gcgttcgggcagcaactgcgcgtgcgcgcgcatctgatcgtgagcgagatgcgccgcgcc
gaagacgacatcgcgcagatgaaaggcgctggcgcgggcagcgtgagcgcggccgtcacg
ccgaccgccgcgctgtcgatcctgccgcaggcgtatcgcgcgttccggcggcagatgccg
aatgcgcgcgtgagtttcatcgaaggctttccgggcgtcgcgatgccgcgtttgcgcgac
ggttcgctcgacttcgtcgtcgcggtggtggtgcccgagcatctcgcgccggagttcgat
cacatcgagttgtatgaaagccgctcggcgatcgtcgggcgtgctgatcatccgttgcgg
cattgcacgtcgctggcggaattgtcggaggcggagtggctgttgaatccgtcgccggaa
agctcgacgcaggcgctgctcgattcatatgccgagcgcggcctgatggtgcccaaacgc
gtgatcgagtgtccgagcttcatcatcgcgcatgggctgttgcgcggatcggatgcgctg
gccgcgctgccctccgcgttgctcgaacatcaatgggtcggcgagggactcgctattttt
ccgatcgccgatccgttgccggcggtgtcggtcagagtcgtgacgcggcgggacagtccg
ttgacgcccgccgccacgttgttgctggaatgtctgcaacacgcggcgcgttcgcagtga
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