Caballeronia sp. NK8: NK8_54140
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Entry
NK8_54140 CDS
T09553
Name
(GenBank) glycoside hydrolase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cabk
Caballeronia sp. NK8
Pathway
cabk00040
Pentose and glucuronate interconversions
cabk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cabk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
NK8_54140
Enzymes [BR:
cabk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
NK8_54140
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-ProteinID:
BCQ27225
LinkDB
All DBs
Position
pNK81:complement(361750..363687)
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AA seq
645 aa
AA seq
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MNQNPALSQLVKHGAAWLAAASIALTLSACGGSDASPSLATTSAATSDVVNSDDGNAAAS
GASADPASGASTPSADPTPTPTPTGFQVGTTTYDPALPPEPTLPLPPQICATLPATLTAQ
PNGLLPDNADSTNTAPDSARIQAALDACKNPSSSGLATNKAVRLVPGPNGANAFVAGALN
LQSGVTLWIDKGVTLFASRDPRQYDKVRGTTSCGIITASDNGCLALINASKIANGAVMGD
GVIDGRGGSPLVSSKPNDPDLMMRPDGNGTMSWWDIGWMANKVQNLAQNNPRLIQISNGR
NFTLYRVTLQNAPKFHVVPSGVDGFTAWGVKIYTPTAVYEAMTNYLGMHYSPDTAKNTDG
IDPASSGPITSNPGNPGKLTGDASNMLIAYTHIRTGDDNIAIKGGTGTVNGRTYNITVAH
SRFYAGHGMSIGSETAGTDAGTANPDVTPVDGVLPSVSNVNVYDLVLDGADNGLRIKSDW
SRSGLVSNIRYSNVCIRMPETSTDGKPQALIFSPYYSPTRNNGLYPNFRNIALDGVRIVN
ASSYTFQGFSSASPVLQGSGWSGGTSGWPAPPVVNPLTISLNNVIADVAPANFTVADALV
TIGAGGTSLPFKTGGTVSVTRTAPGTEAVAPVDCSKAFGPFPGQS
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
ttgaaccaaaaccctgctctttctcagctagtcaagcatggcgccgcctggctcgccgcc
gcgtccatcgcgctgacgctcagcgcgtgcggcggctcggatgcgtcgccgtcactggct
acgacgtccgccgcgaccagcgacgtcgtgaatagcgacgacggcaatgcggcagcatcg
ggcgcatcggccgatccggcatcgggcgcatccacgccttcggcggacccgacgccgaca
ccgacgccgacgggcttccaggttggcacgacgacctacgatcccgcgctgccgccagaa
cccacgctgcccctccccccgcaaatctgcgcgacgctccccgccacgctgaccgcacag
ccgaacggcctgctgcccgacaacgccgactcgaccaacaccgcacccgacagcgcgcgc
atccaggccgcgctcgacgcgtgcaaaaacccgtcgagcagcggtctcgcgaccaacaag
gccgtgcggctcgtccccggcccgaacggcgcgaacgcgttcgtcgccggcgcgctgaac
ctgcaaagcggcgtcacgctctggatcgacaagggcgtcaccctgttcgcctcacgcgat
ccgcgtcaatacgacaaggtcaggggcaccacgagttgcggcatcatcaccgcgagcgac
aacggctgtctcgcgctcatcaacgcgagcaagatcgcgaacggcgcggtgatgggcgat
ggcgtcatcgacggacgcggcggcagcccgctcgtcagcagcaagccgaacgatccggac
ctgatgatgcgtccggatggcaacggtacgatgagctggtgggatatcggctggatggcg
aacaaggtgcagaacctcgcgcagaacaatccgcgcctcatccagatcagcaatggccgc
aacttcacgctgtatcgcgtgacgctgcagaatgcgccgaagtttcacgtcgtgccgagc
ggcgtcgatggcttcaccgcgtggggcgtgaagatctatacgccgaccgccgtctacgag
gccatgacgaactatctcggcatgcactacagcccggacacggcgaagaacacggacggc
atcgatcccgcgagctccggcccgatcacgagcaaccccggcaatcccggcaagctgacc
ggcgatgcgagcaacatgctgatcgcgtacacgcacatccgcaccggcgatgacaacatc
gcgatcaagggcggcaccggcacggtcaacggccgcacgtacaacatcacggtcgcgcac
agccgcttctatgcgggacacggcatgtcgatcggcagcgagacggcgggcacggacgca
ggcacggccaatccggacgtcacgcccgtcgatggcgtcctgccgagcgtgagcaacgtc
aatgtctacgatctcgtgctcgatggcgccgacaacggcctgcgcatcaagtcggactgg
agccgcagcgggctggtgtcgaacatccgttattcgaatgtgtgcattcgcatgccggag
acgtcgacggacggcaagccgcaggcgctgatcttctcgccgtactacagccccacaagg
aacaacgggctctatccgaatttcaggaacatcgcgctcgatggcgtgcgtatcgtcaat
gcgtcgagctatacgttccagggcttcagctccgcgagtccggtcctgcaaggctcgggc
tggtcgggcggcacctccggctggccggcgccgccggtcgtgaatccgttgacgatctcg
ctgaacaacgtcattgcggatgtcgcgcctgcgaatttcacggtcgccgatgcgctcgtc
acgatcggcgcgggcggcacgtcgctgccgttcaagacgggcggcacggtcagcgtcacg
cgcacagcgcccggcacggaagcggtcgcgccggtcgattgcagcaaggcgttcgggccg
tttcccgggcagtcatag
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