Caballeronia sp. NK8: NK8_54970
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Entry
NK8_54970 CDS
T09553
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K17736
AraC family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
cabk
Caballeronia sp. NK8
Brite
KEGG Orthology (KO) [BR:
cabk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cabk03000
]
NK8_54970
Transcription factors [BR:
cabk03000
]
Prokaryotic type
Helix-turn-helix
AraC family
NK8_54970
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
DJ-1_PfpI
Zn_ribbon_LapB
Motif
Other DBs
NCBI-ProteinID:
BCQ27308
LinkDB
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Position
pNK81:complement(455283..456314)
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AA seq
343 aa
AA seq
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MNANDIPPTTRPIKTGRVSASIVGEDAVTQRMGFFLVPHFSMMALSSVTEPLRAANRVSG
KALYSWHLMSADGEPVSSSSGFALLPDFAITSSPELSHVFVVASIGVSNYRNAQVFDFLR
RYAANGSTIGGISLGTMILARAGLLDKRRCTIHWEALKELADEFPSLDVSRDLYCIEGDR
MTCSGGTAAIDMMLDLIARQHGHQLAAEVADQFIHTRMRTAQESQKMAIQWRYGVEDRRI
VHAVTLMEQNIERPIPMKTIASLAGISPRTFERMWIKHFNVRPSQFYLELRLKAAQKLIR
ESSLSLLDVAMQCGFASASHLGRCYKQLFSRTPGQERAASDAR
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgaacgacatcccgccgaccacgcgcccgatcaaaaccgggcgcgtgagcgca
tccatcgtcggcgaagatgcggtgacacaacgcatgggctttttcctggtcccgcatttt
tcgatgatggcgctcagttccgtcaccgagccgctgcgcgcggcgaatcgcgtgagcggc
aaggcgctgtatagctggcatctgatgagcgcggacggcgagccggtttcctcgagctcg
ggattcgcgctgttgccggacttcgcgatcacgtcgtcgcctgaactgagtcatgtgttc
gtggtcgcgagcattggcgtgtcgaactatcgcaatgcgcaggtcttcgatttcctgcgc
cgctatgccgcgaacggatcgacgatcggcggcatcagtctcggcacgatgatcctcgcg
cgcgcgggcctgctcgacaagcggcgctgcacgattcactgggaagcgctcaaggaactc
gccgacgagtttccatcgctcgacgttagccgcgatctctactgcatagaaggcgatcgc
atgacgtgcagcggcggcaccgccgccatcgacatgatgctcgatctgatcgcgcgtcag
cacgggcatcaactcgcggctgaagtggccgatcagttcatccatactcgcatgcgtacc
gcgcaggaaagccagaagatggcgattcaatggcgctacggcgtcgaagaccggcgcatc
gttcatgcggtaacgctgatggaacagaacatcgagcgccctattccgatgaagacgatc
gcatcgctcgcgggcatttcgccacgcacgttcgagcgcatgtggatcaagcatttcaac
gtgcggccttcgcagttctatctggaattgcggctgaaggcggcgcaaaagctgattcgc
gaatcgtcgctttccttgctcgatgtcgcgatgcaatgcggcttcgcgagcgcatcgcat
ctcgggcgctgctacaaacaattgttctccaggacacccggacaggagcgcgccgcgagc
gacgcgcgctga
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