Caballeronia sp. NK8: NK8_60800
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Entry
NK8_60800 CDS
T09553
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
cabk
Caballeronia sp. NK8
Brite
KEGG Orthology (KO) [BR:
cabk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cabk03000
]
NK8_60800
Transcription factors [BR:
cabk03000
]
Prokaryotic type
Helix-turn-helix
IclR family
NK8_60800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
MarR
HTH_24
HTH_10
TetR_C_36
Dimerisation
Motif
Other DBs
NCBI-ProteinID:
BCQ27891
LinkDB
All DBs
Position
pNK81:complement(1112038..1112853)
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AA seq
271 aa
AA seq
DB search
MKSEVGQGEAKAQEKEEGPQRLSSVTAALQLLKVFSEHEPELGISVLAKRMGIAKSTAHR
LASALLSEGMLEQNADNGRYRLGIQLFTLGALVRRRFDVAKQAVPFLHVLREHTDETVHL
AVLDDTSIVYLFNLESDQAIRMRSYIGVRKPAFCTAEGHVLLAARTPDVVSRVLKEGLVA
RTPKTNTDTQVFLKTLDAARRDGYSIDDEESEVGMRGIAAPVRDISGNVVAAVGIGGPAQ
RLTKKALRAAVPHLLTAAEGISATLGFHRPL
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcagaagtagggcagggcgaagcaaaggcgcaggagaaagaggagggaccgcag
cggctgtcgtccgtgaccgcggcgctccagttgttgaaggtgttctcggagcacgagccg
gaattgggcatcagcgtgctcgcgaaacgcatgggcatcgcgaagagcacggcgcaccgg
ctcgcgagcgcattgctgtccgagggcatgctggagcagaacgcggataacgggcgctat
cgcctgggcattcagttgttcacgctgggcgcgctcgtgcggcggcgcttcgatgtcgcg
aagcaggcggtgccgtttctgcacgtgctacgcgagcacaccgacgaaaccgtgcatctc
gcggtgctggacgacacgagcatcgtgtacctgttcaatctcgagagcgatcaggcgatc
cgcatgcgttcgtatatcggcgtgcgcaagcccgcgttctgcaccgccgaaggtcatgtg
ctgctcgcggcgcgcacgccggacgtcgtatcgcgtgtgctgaaagaagggctcgttgcg
cgcacgccgaagaccaacaccgacacgcaggtgttcctgaagacgctggacgcggcgcgc
cgcgacggctattcgatcgacgacgaagagtcggaggtcggcatgcgcggcatcgcggcg
cccgtgcgcgatatctcgggcaacgtggtggccgcggtgggtataggcgggccggcgcaa
cggctcacgaaaaaggcgctgcgcgcagcggtgccgcatttgcttacggcggccgaaggc
atttccgcaaccctcggattccacaggccgctatga
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