Caballeronia sp. NK8: NK8_62770
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Entry
NK8_62770 CDS
T09553
Name
(GenBank) squalene/phytoene synthase family protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
cabk
Caballeronia sp. NK8
Pathway
cabk00100
Steroid biosynthesis
cabk00909
Sesquiterpenoid and triterpenoid biosynthesis
cabk01100
Metabolic pathways
cabk01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
cabk00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
NK8_62770
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
NK8_62770
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cabk01006
]
NK8_62770
Enzymes [BR:
cabk01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
NK8_62770
Prenyltransferases [BR:
cabk01006
]
Terpene biosynthesis
Squalene/phytoene synthase
NK8_62770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
BCQ28088
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All DBs
Position
pNK81:complement(1328116..1329177)
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AA seq
353 aa
AA seq
DB search
MNNSPRAVLLGPLLKSVSRSFYLTLRILPAGMRDPIGLAYLLARAADTIADTSLISPQRR
LELLLSLRAQINGAADDGALARIAGEVAGEQAQPDERALLESLGAALAILPQLGVQDQAA
VRDIVTTLSTGMEFDLRTFPDETSGEIVALQEIGELDRYTYLVAGCVGEFWTKMTYAHEP
GTLKAAPETMLALGVRFGRALQMTNVLRDCARDLRIGRCYLPESMLARHGLTPRDLLQPE
SSARARPVLFDLLRTTLALFQDAVDYTLAIPPSAVRLRLACLWPIMIGLDTLVLLAHNDA
WLDPARISKVRRNDVYRIIAASLPMVASNGMLRAWTARRMRAVEAAISAATRP
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgaacaattcgccccgggccgttcttctgggcccgcttctcaagagcgtgtcgcgctcg
ttctatctcacgctgcgcatcctgccggccggcatgcgcgatcccatcgggctggcgtat
ctgctcgcgcgcgcggcggatacgatcgcggatacctcgctgatttcgccgcaacgccgt
ctcgaactgctgctgtcattgcgcgcgcaaatcaatggcgcagccgatgacggcgcgctc
gcgcgcatcgcgggcgaagtcgccggtgagcaggcacagcctgacgagcgcgcgttgctc
gaaagcctgggcgccgcgctcgcgatcctgccgcagctcggcgttcaggatcaggccgcc
gtccgcgacatcgtcacgacgctcagcaccggcatggagttcgatctgcgcacgttcccc
gacgagacatccggcgagatcgtcgcgttgcaggaaatcggcgagctggaccgctatacg
tatctcgtcgcgggctgcgtcggcgaattctggacgaagatgacctacgcgcacgagccg
ggcacgttgaaggccgcgcccgaaaccatgctcgcgctcggcgtgcgcttcggccgtgcg
ctgcagatgacgaacgtgctgcgcgactgcgcgcgcgatctgcgcatcggccgctgctat
ctgcccgaatcgatgctcgcacgtcatggactgacgccgcgcgatctcctgcaaccggaa
tcgtcggcgcgcgcgcggcccgtgctgttcgatctgttgcgcacgacgcttgcgctgttc
caggacgcggtcgattacacactcgcgattccaccgagcgcggttcgtctgcgcctcgcg
tgcctgtggccgatcatgatcggtctcgacacgctcgtgctgctcgcgcacaacgacgcg
tggctcgatcccgccagaatctcgaaggttcgccgcaacgacgtgtatcgcatcatcgcg
gcatcgttgccgatggtcgcgtcgaacggcatgttgcgcgcgtggaccgcccgccgcatg
cgcgcagtcgaagccgcgatcagcgccgcaactcggccatga
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