KEGG   Caballeronia sp. NK8: NK8_64840
Entry
NK8_64840         CDS       T09553                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
cabk  Caballeronia sp. NK8
Pathway
cabk00010  Glycolysis / Gluconeogenesis
cabk00020  Citrate cycle (TCA cycle)
cabk00260  Glycine, serine and threonine metabolism
cabk00280  Valine, leucine and isoleucine degradation
cabk00310  Lysine degradation
cabk00380  Tryptophan metabolism
cabk00620  Pyruvate metabolism
cabk00630  Glyoxylate and dicarboxylate metabolism
cabk00640  Propanoate metabolism
cabk00670  One carbon pool by folate
cabk00785  Lipoic acid metabolism
cabk01100  Metabolic pathways
cabk01110  Biosynthesis of secondary metabolites
cabk01120  Microbial metabolism in diverse environments
cabk01200  Carbon metabolism
cabk01210  2-Oxocarboxylic acid metabolism
cabk01240  Biosynthesis of cofactors
Module
cabk_M00009  Citrate cycle (TCA cycle, Krebs cycle)
cabk_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
cabk_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
cabk_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:cabk00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    NK8_64840 (lpdA)
   00020 Citrate cycle (TCA cycle)
    NK8_64840 (lpdA)
   00620 Pyruvate metabolism
    NK8_64840 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    NK8_64840 (lpdA)
   00640 Propanoate metabolism
    NK8_64840 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    NK8_64840 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    NK8_64840 (lpdA)
   00310 Lysine degradation
    NK8_64840 (lpdA)
   00380 Tryptophan metabolism
    NK8_64840 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    NK8_64840 (lpdA)
   00670 One carbon pool by folate
    NK8_64840 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cabk04147]
    NK8_64840 (lpdA)
Enzymes [BR:cabk01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     NK8_64840 (lpdA)
Exosome [BR:cabk04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   NK8_64840 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox Pyr_redox_3 FAD_binding_2 AlaDh_PNT_C HI0933_like GIDA FAD_oxidored NAD_binding_8 FAD_binding_3 Lys_Orn_oxgnase 3HCDH_N Thi4 Biotin_lipoyl_2 IFT46_B_C
Other DBs
NCBI-ProteinID: BCQ28295
LinkDB
Position
pNK81:1572208..1573980
AA seq 590 aa
MARIEVKVPQLSESVTEATMLPWKKKAGDAVAQDEILVELETDKVVLEVPAPSAGTLAEV
VKQAGEIVHADEVLAIIDTEAKASAAAPAPAPEKPAAQPAAQTTAQSTPAAASGQKADFD
VIVIGSGPGGYIAAIRAAQLGRKVACVEEWINHAGKPKLGGTCLNVGCIPSKALLASSEQ
FEKAQLHFGDLGINMDNLSVDVDKMVGRKEAIVEKITGGVEFLFRKNKITWLKGHGKLAG
KDGANFKIDVSGDGKTESHTAQHVIIATGSKARHLPDVPVDNKSVSDNEGALAFTSVPKK
LAVIGAGVIGLELGSVWRRLGAEVTILEALPEFLGTTDTALQKEAAKLFKKQGLTIHLGV
KIDDVKTTDSSVAISYKDKDGNAQTLDADRLIVSIGRVPNTDDLGLDSIGLSADERGFIP
VDGHCATKVPNVYAIGDVVRGPMLAHKAEDEGVLVAEIIDGQKPHIDYNCIPWVIYTHPE
IAWVGQTEQALKAAGRETKAGQFPMMANGRAMGIGETDGFIKIIADAKTDEILGVHIISA
NASDLIAEAVVAMEFKAASEDLGRICHPHPSLSEVMREAALAVDKRALNI
NT seq 1773 nt   +upstreamnt  +downstreamnt
atggccaggattgaagtcaaggttccgcagctttccgaatccgtcaccgaagcgacgatg
ttgccgtggaagaagaaagcgggcgacgccgtggcgcaagacgaaatcctcgtcgaactg
gaaacggacaaggtcgtgctggaagtgcccgcgccctcggcgggcacgctcgcggaagtc
gtgaagcaggctggcgagatcgttcacgcggacgaagtgctcgccatcatcgataccgaa
gcgaaagcgtccgccgccgcgcctgcgcccgcgccggaaaaacccgccgcacaacccgcc
gcgcaaaccacggcacaatccacgcccgccgccgcgtcaggccagaaggccgacttcgat
gtgatcgtgatcggctccggccccggcggctacatcgccgcgatccgcgccgcgcagctc
ggccgcaaggtcgcgtgcgtcgaggaatggatcaaccacgccggcaagccgaagctcggc
ggaacgtgcctcaacgtgggctgcattccgtcgaaggcgctgctggcgtcgagcgagcaa
ttcgagaaggcgcagctccatttcggcgatctcggcatcaacatggacaacctttctgtc
gacgtcgacaaaatggtcgggcgcaaggaagcgatcgtcgaaaagatcacgggcggcgtc
gaattcctgttccgcaagaacaagatcacgtggctcaagggtcacggcaagctcgcgggc
aaggacggcgcgaacttcaaaatcgacgtgagcggcgacggcaagaccgaaagccatacc
gcgcaacacgtgatcatcgcgacgggctcgaaggcgcgtcatctgccggacgtgccggtc
gacaacaagtccgtctccgacaacgaaggcgcgctcgccttcacgtccgtgccgaaaaag
ctcgccgtgatcggcgcgggcgtgatcggcctcgaactcggctcggtgtggcgcaggctc
ggcgcagaagtgacgattctcgaagcgctgcccgaattcctcggcacgaccgacaccgcg
ctgcaaaaggaagccgcgaagctcttcaagaagcagggactgacgattcacctcggcgtg
aagatcgatgacgtgaaaaccaccgattcgagcgttgccatttcctacaaggacaaggac
ggcaacgcgcagacgctcgatgcggaccgcctgatcgtgtcgataggccgcgtgccgaac
acggacgatctcggcctcgattcgattggcctttcagccgacgagcgcggcttcattccc
gtcgacggtcattgcgcgacgaaagtcccgaacgtctacgcgatcggcgatgtcgtgcgc
ggcccgatgctcgcgcacaaggccgaggacgaaggcgtgctggtggcggaaatcatcgac
gggcagaagccgcacatcgactacaactgcattccgtgggtgatctacacgcatccggaa
atcgcgtgggtcgggcagacggagcaggcgctgaaagcggcgggccgcgaaaccaaggcc
ggccagttcccgatgatggcgaacggccgcgcgatgggcatcggcgagacggacggcttc
atcaagatcatcgccgatgcgaaaaccgacgagattctcggcgtgcatatcatctcggcg
aacgcgtcggatctgatcgccgaagcggtagtcgcgatggaattcaaggcggcgagcgaa
gatctcgggcgcatttgccatccgcatccttcattgtctgaagtgatgcgggaggcggcg
ctcgcggtggacaagcgggcgttgaatatctga

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