Caballeronia sp. NK8: NK8_64840
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Entry
NK8_64840 CDS
T09553
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
cabk
Caballeronia sp. NK8
Pathway
cabk00010
Glycolysis / Gluconeogenesis
cabk00020
Citrate cycle (TCA cycle)
cabk00260
Glycine, serine and threonine metabolism
cabk00280
Valine, leucine and isoleucine degradation
cabk00310
Lysine degradation
cabk00380
Tryptophan metabolism
cabk00620
Pyruvate metabolism
cabk00630
Glyoxylate and dicarboxylate metabolism
cabk00640
Propanoate metabolism
cabk00670
One carbon pool by folate
cabk00785
Lipoic acid metabolism
cabk01100
Metabolic pathways
cabk01110
Biosynthesis of secondary metabolites
cabk01120
Microbial metabolism in diverse environments
cabk01200
Carbon metabolism
cabk01210
2-Oxocarboxylic acid metabolism
cabk01240
Biosynthesis of cofactors
Module
cabk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
cabk_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
cabk_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
cabk_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
cabk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
NK8_64840 (lpdA)
00020 Citrate cycle (TCA cycle)
NK8_64840 (lpdA)
00620 Pyruvate metabolism
NK8_64840 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
NK8_64840 (lpdA)
00640 Propanoate metabolism
NK8_64840 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NK8_64840 (lpdA)
00280 Valine, leucine and isoleucine degradation
NK8_64840 (lpdA)
00310 Lysine degradation
NK8_64840 (lpdA)
00380 Tryptophan metabolism
NK8_64840 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
NK8_64840 (lpdA)
00670 One carbon pool by folate
NK8_64840 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cabk04147
]
NK8_64840 (lpdA)
Enzymes [BR:
cabk01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
NK8_64840 (lpdA)
Exosome [BR:
cabk04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
NK8_64840 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Biotin_lipoyl
Pyr_redox
Pyr_redox_3
FAD_binding_2
AlaDh_PNT_C
HI0933_like
GIDA
FAD_oxidored
NAD_binding_8
FAD_binding_3
Lys_Orn_oxgnase
3HCDH_N
Thi4
Biotin_lipoyl_2
IFT46_B_C
Motif
Other DBs
NCBI-ProteinID:
BCQ28295
LinkDB
All DBs
Position
pNK81:1572208..1573980
Genome browser
AA seq
590 aa
AA seq
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MARIEVKVPQLSESVTEATMLPWKKKAGDAVAQDEILVELETDKVVLEVPAPSAGTLAEV
VKQAGEIVHADEVLAIIDTEAKASAAAPAPAPEKPAAQPAAQTTAQSTPAAASGQKADFD
VIVIGSGPGGYIAAIRAAQLGRKVACVEEWINHAGKPKLGGTCLNVGCIPSKALLASSEQ
FEKAQLHFGDLGINMDNLSVDVDKMVGRKEAIVEKITGGVEFLFRKNKITWLKGHGKLAG
KDGANFKIDVSGDGKTESHTAQHVIIATGSKARHLPDVPVDNKSVSDNEGALAFTSVPKK
LAVIGAGVIGLELGSVWRRLGAEVTILEALPEFLGTTDTALQKEAAKLFKKQGLTIHLGV
KIDDVKTTDSSVAISYKDKDGNAQTLDADRLIVSIGRVPNTDDLGLDSIGLSADERGFIP
VDGHCATKVPNVYAIGDVVRGPMLAHKAEDEGVLVAEIIDGQKPHIDYNCIPWVIYTHPE
IAWVGQTEQALKAAGRETKAGQFPMMANGRAMGIGETDGFIKIIADAKTDEILGVHIISA
NASDLIAEAVVAMEFKAASEDLGRICHPHPSLSEVMREAALAVDKRALNI
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggccaggattgaagtcaaggttccgcagctttccgaatccgtcaccgaagcgacgatg
ttgccgtggaagaagaaagcgggcgacgccgtggcgcaagacgaaatcctcgtcgaactg
gaaacggacaaggtcgtgctggaagtgcccgcgccctcggcgggcacgctcgcggaagtc
gtgaagcaggctggcgagatcgttcacgcggacgaagtgctcgccatcatcgataccgaa
gcgaaagcgtccgccgccgcgcctgcgcccgcgccggaaaaacccgccgcacaacccgcc
gcgcaaaccacggcacaatccacgcccgccgccgcgtcaggccagaaggccgacttcgat
gtgatcgtgatcggctccggccccggcggctacatcgccgcgatccgcgccgcgcagctc
ggccgcaaggtcgcgtgcgtcgaggaatggatcaaccacgccggcaagccgaagctcggc
ggaacgtgcctcaacgtgggctgcattccgtcgaaggcgctgctggcgtcgagcgagcaa
ttcgagaaggcgcagctccatttcggcgatctcggcatcaacatggacaacctttctgtc
gacgtcgacaaaatggtcgggcgcaaggaagcgatcgtcgaaaagatcacgggcggcgtc
gaattcctgttccgcaagaacaagatcacgtggctcaagggtcacggcaagctcgcgggc
aaggacggcgcgaacttcaaaatcgacgtgagcggcgacggcaagaccgaaagccatacc
gcgcaacacgtgatcatcgcgacgggctcgaaggcgcgtcatctgccggacgtgccggtc
gacaacaagtccgtctccgacaacgaaggcgcgctcgccttcacgtccgtgccgaaaaag
ctcgccgtgatcggcgcgggcgtgatcggcctcgaactcggctcggtgtggcgcaggctc
ggcgcagaagtgacgattctcgaagcgctgcccgaattcctcggcacgaccgacaccgcg
ctgcaaaaggaagccgcgaagctcttcaagaagcagggactgacgattcacctcggcgtg
aagatcgatgacgtgaaaaccaccgattcgagcgttgccatttcctacaaggacaaggac
ggcaacgcgcagacgctcgatgcggaccgcctgatcgtgtcgataggccgcgtgccgaac
acggacgatctcggcctcgattcgattggcctttcagccgacgagcgcggcttcattccc
gtcgacggtcattgcgcgacgaaagtcccgaacgtctacgcgatcggcgatgtcgtgcgc
ggcccgatgctcgcgcacaaggccgaggacgaaggcgtgctggtggcggaaatcatcgac
gggcagaagccgcacatcgactacaactgcattccgtgggtgatctacacgcatccggaa
atcgcgtgggtcgggcagacggagcaggcgctgaaagcggcgggccgcgaaaccaaggcc
ggccagttcccgatgatggcgaacggccgcgcgatgggcatcggcgagacggacggcttc
atcaagatcatcgccgatgcgaaaaccgacgagattctcggcgtgcatatcatctcggcg
aacgcgtcggatctgatcgccgaagcggtagtcgcgatggaattcaaggcggcgagcgaa
gatctcgggcgcatttgccatccgcatccttcattgtctgaagtgatgcgggaggcggcg
ctcgcggtggacaagcgggcgttgaatatctga
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